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Phenotypic Abnormality (PA): Aplasia/hypoplasia involving bones of the extremities

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Phenotypic abnormality [HP:0000118] <25>
+ + + 3:   Abnormality of the skeletal system [HP:0000924] <7>(89|98) (94|51|33)
+ + + 3:   Abnormality of skeletal morphology [HP:0011842] <18>(87|89) (90|49|32)
+ + 2:   Aplasia/hypoplasia involving the skeleton [HP:0009115] <2>(13|11) (13|10|17)
+ + 2:   Abnormality of limb bone [HP:0040068] <1>(28|30) (30|18|20)
+ + 2:   Abnormal appendicular skeleton morphology [HP:0011844] <4>(35|41) (38|23|23)
+ + 2:   Abnormality of limbs [HP:0040064] <8>(57|64) (59|32|25)
+ 1:   Abnormality of limb bone morphology [HP:0002813] <13>(28|30) (30|18|20)
+ 1:   Aplasia/hypoplasia of the extremities [HP:0009815] <6>(8|9) (9|3|5)
0:   Aplasia/hypoplasia involving bones of the extremities [HP:0045060] <3>(7|8) (8|3|5)
- 1:   Aplasia/hypoplasia involving bones of the lower limbs [HP:0006493] <10>(5|4) (5|3|4)
- 1:   Aplasia/hypoplasia involving bones of the upper limbs [HP:0006496] <8>(3|8) (6|2|4)
- 1:   Aplasia involving bones of the extremities [HP:0009825] <2>(0|1) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ARID-like0.002083Inherited
BRK domain-like0.002944Inherited
Arginase/deacetylase0.002944Inherited
Multidrug efflux transporter AcrB transmembrane domain0.009413Inherited
p53-like transcription factors0.03901Inherited
Cystine-knot cytokines0.5159Inherited
Immunoglobulin0.6498Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Histone deacetylase, HDAC0Direct
ARID domain0.001248Inherited
BRK domain-like0.0018Inherited
RecA protein-like (ATPase-domain)0.01826Inherited
Notch domain0.08476Inherited
Homeodomain0.4864Inherited
I set domains0.5546Inherited
Transforming growth factor (TGF)-beta0.6183Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ARID-like0.001194Inherited
BRK domain-like0.001737Inherited
Arginase/deacetylase0.001737Inherited
Multidrug efflux transporter AcrB transmembrane domain0.006107Inherited
p53-like transcription factors0.02825Inherited
Notch domain0.07883Inherited
Cystine-knot cytokines0.4726Inherited
Immunoglobulin0.6105Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.001194Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.137Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.7806Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,57184,57196
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0Direct
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.001194Inherited
    57196,57184,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.06437Inherited
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.07908Inherited
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.7276Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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