SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Phenotypic Abnormality (PA): Ovarian neoplasm

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Neoplasm [HP:0002664] <2>(20|24) (24|8|3)
+ + + + + 5:   Phenotypic abnormality [HP:0000118] <25>
+ + + + 4:   Abnormal reproductive system morphology [HP:0012243] <10>(27|26) (27|4|1)
+ + + + 4:   Neoplasm by anatomical site [HP:0011793] <24>(18|21) (21|7|2)
+ + + + 4:   Abnormality of the genitourinary system [HP:0000119] <5>(74|72) (79|29|9)
+ + + 3:   Neoplasm of the genitourinary tract [HP:0007379] <4>(6|7) (8|2|1)
+ + + 3:   Abnormality of the genital system [HP:0000078] <3>(34|34) (36|10|3)
+ + + 3:   Abnormal internal genitalia [HP:0000812] <9>(15|17) (16|2|0)
+ + + 3:   Abnormality of the female genitalia [HP:0010460] <2>(16|18) (18|2|0)
+ + 2:   Abnormality of female internal genitalia [HP:0000008] <5>(14|16) (16|2|0)
+ + 2:   Genital neoplasm [HP:0010787] <6>(6|5) (7|2|0)
+ 1:   Gonadal neoplasm [HP:0010785] <4>(6|4) (7|2|0)
+ 1:   Abnormality of the ovary [HP:0000137] <3>(8|6) (9|2|0)
0:   Ovarian neoplasm [HP:0100615] <8>(4|3) (4|2|0)
- 1:   Ovarian sex cord-stromal tumor [HP:0031918] <2>(0|0) (0|0|0)
- 1:   Ovarian teratoma [HP:0012226] <1>(0|0) (0|0|0)
- 1:   Dysgerminoma [HP:0100621](0|0) (0|0|0)
- 1:   Malignant ovarian granulosa cell tumor [HP:0031920](0|0) (0|0|0)
- 1:   Ovarian carcinoma [HP:0025318](0|0) (0|0|0)
- 1:   Ovarian fibroma [HP:0010618](0|0) (0|0|0)
- 1:   Ovarian gonadoblastoma [HP:0000149](0|0) (0|0|0)
- 1:   Ovarian papillary adenocarcinoma [HP:0006774](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DNA repair protein MutS, domain III0.000003587Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.00001383Direct
Ribosomal protein S5 domain 2-like0.0002302Direct
BRCT domain0.0002837Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DNA gyrase/MutL, second domain0.0000000459Direct
DNA gyrase/MutL, N-terminal domain0.0000000459Direct
DNA repair protein MutS, domain III0.000002198Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DNA repair protein MutS, domain III0.000001544Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.000006186Direct
Ribosomal protein S5 domain 2-like0.0001155Direct
BRCT domain0.0001437Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0.00000002936Direct
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000001544Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)