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Phenotypic Abnormality (PA): Abnormality of the lymphatic system

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Root: HP Hierarchy (human phenotype with 3 sub-ontologies PA, MI, ON)

Shortest distance to current term (+ for parents, - for children) HP term [HP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Abnormality of the cardiovascular system [HP:0001626] <5>(59|81) (72|39|29)
+ + 2:   Phenotypic abnormality [HP:0000118] <25>
+ 1:   Abnormality of the vasculature [HP:0002597] <13>(33|53) (44|26|18)
+ 1:   Abnormality of the immune system [HP:0002715] <3>(37|52) (39|28|15)
0:   Abnormality of the lymphatic system [HP:0100763] <7>(10|17) (14|6|4)
- 1:   Abnormality of the lymph nodes [HP:0002733] <6>(4|9) (7|5|2)
- 1:   Abnormality of the tonsils [HP:0100765] <6>(0|0) (0|0|0)
- 1:   Abnormal lymphatic vessel morphology [HP:0100766] <5>(0|0) (0|0|0)
- 1:   Abnormality of the thymus [HP:0000777] <5>(0|0) (0|0|0)
- 1:   Abnormality of the spleen [HP:0001743] <2>(7|12) (8|2|2)
- 1:   Lymphangioma [HP:0100764] <2>(0|0) (0|0|0)
- 1:   Abnormal pulmonary lymphatics [HP:0006529] <1>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
DEATH domain0.000001622Direct
TNF receptor-like0.00001163Direct
Globin-like0.0001488Direct
Caspase-like0.004221Inherited
Notch domain0.03858Inherited
TNF-like0.07007Inherited
RNI-like0.1036Inherited
(Trans)glycosidases0.1147Inherited
Fibrinogen C-terminal domain-like0.1644Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
Fibrinogen coiled-coil and central regions0Direct
Globins0.00009298Direct
TNF receptor-like0.0001813Direct
Pyrin domain, PYD0.0005447Direct
STAT DNA-binding domain0.002219Inherited
STAT0.002219Inherited
Transcription factor STAT-4 N-domain0.002219Inherited
Caspase recruitment domain, CARD0.00967Inherited
Ras-binding domain, RBD0.01142Inherited
28-residue LRR0.01582Inherited
DEATH domain, DD0.01669Inherited
beta-glycanases0.02943Inherited
Notch domain0.02943Inherited
TNF-like0.05765Inherited
Tetratricopeptide repeat (TPR)0.1041Inherited
Fibrinogen C-terminal domain-like0.1415Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Fibrinogen coiled-coil and central regions0Direct
DEATH domain0.0000006868Direct
TNF receptor-like0.00000516Direct
Globin-like0.00007258Direct
Transcription factor STAT-4 N-domain0.00193Inherited
STAT0.00193Inherited
Caspase-like0.00257Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.01071Inherited
Notch domain0.02791Inherited
TNF-like0.05363Inherited
RNI-like0.08188Inherited
(Trans)glycosidases0.09148Inherited
Fibrinogen C-terminal domain-like0.1358Inherited
SH3-domain0.3343Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.000001805Direct
    47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0004588Direct
    48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0.00193Inherited
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.00193Inherited
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.00193Inherited
    47986,47986
  • 47986 - DEATH domain
  • 47986 - DEATH domain
  • 0.008752Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0.00193Inherited
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0.00193Inherited
    57586,57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.00257Inherited
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.04974Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)