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Mammalian Phenotype (MP): abnormal cochlear sensory epithelium morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   mammalian phenotype [MP:0000001] <29>
+ + + + 4:   hearing/vestibular/ear phenotype [MP:0005377] <2>(20|24) (23|14|5)
+ + + 3:   abnormal ear morphology [MP:0002102] <4>(16|21) (18|14|5)
+ + 2:   abnormal inner ear morphology [MP:0000026] <15>(13|15) (13|11|5)
+ 1:   abnormal cochlea morphology [MP:0000031] <15>(12|14) (13|8|5)
0:   abnormal cochlear sensory epithelium morphology [MP:0003308] <1>(10|12) (10|7|5)
- 1:   abnormal cochlear hair cell morphology [MP:0002622] <6>(10|12) (10|7|5)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0.00005787Direct
Nicotinic receptor ligand binding domain-like0.001507Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.001507Inherited
Cadherin-like0.002163Inherited
lambda repressor-like DNA-binding domains0.01241Inherited
PDZ domain-like0.0134Inherited
Second domain of FERM0.03429Inherited
Growth factor receptor domain0.3195Inherited
SH3-domain0.4035Inherited
EGF/Laminin0.5468Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0.00003058Direct
DIX domain0.00004605Direct
DEP domain0.0006003Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0009086Direct
Nicotinic receptor ligand binding domain-like0.0009086Direct
Growth factor receptor domain0.0009611Direct
Cadherin0.001038Inherited
PDZ domain0.00139Inherited
POU-specific domain0.002802Inherited
Motor proteins0.02276Inherited
SH3-domain0.3654Inherited
EGF-type module0.4361Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Frizzled cysteine-rich domain0.00002728Direct
Nicotinic receptor ligand binding domain-like0.0008443Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0008443Direct
Cadherin-like0.001233Inherited
lambda repressor-like DNA-binding domains0.007875Inherited
PDZ domain-like0.008535Inherited
Second domain of FERM0.02354Inherited
Growth factor receptor domain0.2754Inherited
SH3-domain0.3567Inherited
EGF/Laminin0.5Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0003842Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.0008443Direct
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.0008443Direct
    50156,50156
  • 50156 - PDZ domain-like
  • 50156 - PDZ domain-like
  • 0.002265Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.004439Inherited
    57184,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.007875Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.367Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0003423Direct
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.0005572Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.0006366Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.001031Inherited
    57184,57196,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.001031Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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