SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): cleft palate

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   mammalian phenotype [MP:0000001] <29>
+ + + + + 5:   growth/size/body region phenotype [MP:0005378] <12>(64|95) (71|47|27)
+ + + + + 5:   craniofacial phenotype [MP:0005382] <1>(20|36) (24|17|10)
+ + + + 4:   abnormal craniofacial morphology [MP:0000428] <5>(20|36) (24|17|10)
+ + + + 4:   abnormal head morphology [MP:0000432] <8>(12|23) (14|5|2)
+ + + 3:   digestive/alimentary phenotype [MP:0005381] <2>(38|46) (40|19|9)
+ + + 3:   abnormal facial morphology [MP:0003743] <10>(8|18) (8|3|2)
+ + 2:   abnormal mouth morphology [MP:0000452] <13>(6|13) (6|1|2)
+ + 2:   abnormal digestive system morphology [MP:0000462] <21>(30|38) (31|13|3)
+ 1:   abnormal palate morphology [MP:0003755] <10>(4|7) (4|0|1)
0:   cleft palate [MP:0000111] <2>(2|5) (3|0|0)
- 1:   cleft secondary palate [MP:0009890] <4>(0|2) (1|0|0)
- 1:   cleft primary palate [MP:0009893](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Cystine-knot cytokines0.00000195Direct
p53-like transcription factors0.0002123Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Transforming growth factor (TGF)-beta0.0000004104Direct
T-box0.0001474Direct
Pyridoxal-dependent decarboxylase0.0002106Direct
Ephrin ectodomain0.0004218Direct
VWC domain0.004379Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cystine-knot cytokines0.0000008048Direct
p53-like transcription factors0.0001077Direct
FnI-like domain0.005934Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)