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Mammalian Phenotype (MP): abnormal cartilage morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   skeleton phenotype [MP:0005390] <2>(46|63) (50|41|26)
+ 1:   abnormal skeleton morphology [MP:0005508] <15>(41|59) (47|38|25)
0:   abnormal cartilage morphology [MP:0000163] <14>(8|14) (11|7|2)
- 1:   abnormal intervertebral disk morphology [MP:0004173] <8>(4|5) (4|3|0)
- 1:   abnormal long bone epiphyseal plate morphology [MP:0003055] <6>(2|4) (2|4|2)
- 1:   abnormal cartilage development [MP:0000164] <4>(2|2) (2|3|2)
- 1:   abnormal tracheal cartilage morphology [MP:0003120] <4>(0|0) (1|1|0)
- 1:   abnormal Meckel's cartilage morphology [MP:0005587] <3>(1|1) (1|0|0)
- 1:   abnormal chondrocyte morphology [MP:0000166] <3>(0|0) (0|0|0)
- 1:   abnormal Reichert's cartilage morphology [MP:0004915] <1>(0|0) (0|0|0)
- 1:   abnormal hyaline cartilage morphology [MP:0006429] <1>(0|1) (1|0|0)
- 1:   abnormal nasal capsule morphology [MP:0004726] <1>(1|1) (1|0|0)
- 1:   abnormal costal cartilage morphology [MP:0006432](0|0) (0|0|0)
- 1:   abnormal elastic cartilage morphology [MP:0006430](0|0) (0|0|0)
- 1:   abnormal fibrocartilage morphology [MP:0006431](0|0) (0|0|0)
- 1:   absent cartilage [MP:0002898](1|1) (1|0|0)
- 1:   ectopic cartilage [MP:0003869](0|1) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
p53 tetramerization domain0Direct
Homeodomain-like0.00129Inherited
Metalloproteases ("zincins"), catalytic domain0.001644Inherited
p53-like transcription factors0.002037Inherited
PGBD-like0.004585Inherited
Nuclear receptor ligand-binding domain0.005643Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.04708Inherited
HMG-box0.274Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
p53 DNA-binding domain-like0Direct
Retinoblastoma tumor suppressor domains0Direct
p53 tetramerization domain0Direct
Homeodomain0.001379Inherited
MMP N-terminal domain0.003572Inherited
Matrix metalloproteases, catalytic domain0.003572Inherited
Nuclear receptor ligand-binding domain0.004852Inherited
Nuclear receptor0.004852Inherited
Arylsulfatase0.01091Inherited
Ngr ectodomain-like0.01704Inherited
T-box0.03125Inherited
Rel/Dorsal transcription factors, DNA-binding domain0.101Inherited
EGF-type module0.1218Inherited
HMG-box0.2629Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
p53 tetramerization domain0Direct
Homeodomain-like0.0007161Direct
Hemopexin-like domain0.000807Direct
Alkaline phosphatase-like0.000807Direct
Metalloproteases ("zincins"), catalytic domain0.0009249Direct
p53-like transcription factors0.001159Inherited
PGBD-like0.002727Inherited
Nuclear receptor ligand-binding domain0.0034Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.03316Inherited
L domain-like0.09719Inherited
HMG-box0.2323Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49417,47719
  • 49417 - p53-like transcription factors
  • 47719 - p53 tetramerization domain
  • 0Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.002727Inherited
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.002763Inherited
    57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.008758Inherited
    57603,57603
  • 57603 - FnI-like domain
  • 57603 - FnI-like domain
  • 0.02657Inherited
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.02657Inherited
    49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
  • 0.08746Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.008758Inherited
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.02657Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)