SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): abnormal femur morphology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   skeleton phenotype [MP:0005390] <2>(46|63) (50|41|26)
+ + + + + 5:   mammalian phenotype [MP:0000001] <29>
+ + + + 4:   abnormal skeleton morphology [MP:0005508] <15>(41|59) (47|38|25)
+ + + + 4:   limbs/digits/tail phenotype [MP:0005371] <2>(18|26) (22|21|17)
+ + + 3:   abnormal limb morphology [MP:0002109] <13>(12|21) (15|17|16)
+ + + 3:   abnormal appendicular skeleton morphology [MP:0009250] <4>(12|17) (17|12|13)
+ + 2:   abnormal hindlimb morphology [MP:0000556] <4>(3|6) (5|5|3)
+ + 2:   abnormal long bone morphology [MP:0003723] <11>(7|13) (11|11|11)
+ + 2:   abnormal limb bone morphology [MP:0002115] <5>(5|9) (7|8|8)
+ 1:   abnormal hindlimb stylopod morphology [MP:0003856] <1>(2|4) (4|2|1)
+ 1:   abnormal limb long bone morphology [MP:0011504] <10>(5|9) (7|7|7)
0:   abnormal femur morphology [MP:0000559] <10>(2|4) (4|2|1)
- 1:   abnormal femur compact bone thickness [MP:0013622] <2>(0|0) (0|0|0)
- 1:   abnormal trochanter morphology [MP:0004627](0|0) (0|0|0)
- 1:   absent femur [MP:0004349](0|1) (1|0|0)
- 1:   bowed femur [MP:0004371](0|0) (0|0|0)
- 1:   decreased diameter of femur [MP:0008152](0|0) (0|0|0)
- 1:   decreased internal diameter of femur [MP:0013621](0|0) (0|0|0)
- 1:   increased diameter of femur [MP:0008158](0|0) (0|0|0)
- 1:   increased internal diameter of femur [MP:0013620](0|0) (0|0|0)
- 1:   long femur [MP:0004348](0|0) (0|0|0)
- 1:   short femur [MP:0003109](1|0) (1|1|1)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Metalloproteases ("zincins"), catalytic domain0.00009133Direct
PGBD-like0.0005244Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
MMP N-terminal domain0.0003997Direct
Matrix metalloproteases, catalytic domain0.0005071Direct
Hemopexin-like domain0.0007765Direct
Homeodomain0.9768Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Metalloproteases ("zincins"), catalytic domain0.00004382Direct
PGBD-like0.0002777Direct
Hemopexin-like domain0.0005507Direct
Homeodomain-like0.9671Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.0002777Direct
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.002006Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.001601Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)