SUPERFAMILY 1.75 HMM library and genome assignments server

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Mammalian Phenotype (MP): enlarged lymph nodes

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   mammalian phenotype [MP:0000001] <29>
+ + + + + 5:   immune system phenotype [MP:0005387] <2>(76|114) (86|66|35)
+ + + + 4:   abnormal immune system morphology [MP:0000685] <3>(50|76) (60|35|18)
+ + + 3:   abnormal immune system organ morphology [MP:0002722] <8>(21|31) (26|15|9)
+ + 2:   abnormal lymph organ size [MP:0002221] <5>(7|16) (10|10|5)
+ + 2:   abnormal lymph node morphology [MP:0002339] <11>(10|10) (12|4|1)
+ 1:   abnormal lymph node size [MP:0000701] <2>(7|8) (8|3|0)
0:   enlarged lymph nodes [MP:0000702] <1>(4|5) (4|2|0)
- 1:   lymph node hyperplasia [MP:0008102](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
DEATH domain0.0000002997Direct
CCCH zinc finger0.000008246Direct
TNF receptor-like0.0001839Direct
Bcl-2 inhibitors of programmed cell death0.0008568Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
CCCH zinc finger0.000005486Direct
TNF receptor-like0.0004792Direct
Bcl-2 inhibitors of programmed cell death0.0005838Direct
Interferon regulatory factor0.0005838Direct
DEATH domain, DD0.0007517Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
DEATH domain0.00000012Direct
CCCH zinc finger0.000003594Direct
TNF receptor-like0.00009263Direct
Bcl-2 inhibitors of programmed cell death0.0004641Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.00007819Direct
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.0009258Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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