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Mammalian Phenotype (MP): abnormal nervous system tract morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ 1:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
0:   abnormal nervous system tract morphology [MP:0000778] <8>(5|10) (7|5|4)
- 1:   abnormal brain commissure morphology [MP:0002199] <3>(1|7) (3|4|3)
- 1:   abnormal optic tract morphology [MP:0004267] <3>(0|1) (0|1|0)
- 1:   abnormal corticospinal tract morphology [MP:0002878] <2>(0|0) (0|0|0)
- 1:   abnormal mammillothalamic tract morphology [MP:0012454] <2>(0|0) (0|0|0)
- 1:   abnormal spinal cord commissure morphology [MP:0009694] <2>(3|3) (3|1|1)
- 1:   abnormal anterior corticospinal tract morphology [MP:0009682](0|0) (0|0|0)
- 1:   abnormal cingulum morphology [MP:0008232](0|0) (0|0|0)
- 1:   abnormal lateral corticospinal tract morphology [MP:0009683](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Galactose-binding domain-like0.0003227Direct
Concanavalin A-like lectins/glucanases0.005254Inherited
Sema domain0.0329Inherited
EGF/Laminin0.1535Inherited
L domain-like0.3398Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Other IPT/TIG domains0Direct
Ephrin receptor ligand binding domain0.000117Direct
SAM (sterile alpha motif) domain0.0009545Direct
Phosphotyrosine-binding domain (PTB)0.02472Inherited
Sema domain0.02504Inherited
Plexin repeat0.04217Inherited
EGF-type module0.04248Inherited
Laminin G-like module0.04921Inherited
Ngr ectodomain-like0.06454Inherited
Homeodomain0.08176Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Galactose-binding domain-like0.0001672Direct
Concanavalin A-like lectins/glucanases0.003156Inherited
Sema domain0.02252Inherited
Plexin repeat0.03811Inherited
Homeodomain-like0.09127Inherited
EGF/Laminin0.1218Inherited
L domain-like0.2948Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
56112,47769
  • 56112 - Protein kinase-like (PK-like)
  • 47769 - SAM/Pointed domain
  • 0.00009854Direct
    49785,49899
  • 49785 - Galactose-binding domain-like
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.0017Inherited
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.002563Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.02252Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1247Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50044,50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.00005414Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.004874Inherited
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.02501Inherited
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1569Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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