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Mammalian Phenotype (MP): abnormal hippocampus morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   mammalian phenotype [MP:0000001] <29>
+ + + + + 5:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ + + + 4:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
+ + + 3:   abnormal brain morphology [MP:0002152] <24>(25|42) (35|24|14)
+ + 2:   abnormal forebrain morphology [MP:0000783] <8>(18|26) (24|15|8)
+ + 2:   abnormal cerebral hemisphere morphology [MP:0008540] <9>(8|12) (10|8|4)
+ 1:   abnormal limbic system morphology [MP:0004166] <6>(7|8) (9|5|2)
+ 1:   abnormal telencephalon morphology [MP:0000787] <9>(15|22) (19|12|6)
+ 1:   abnormal temporal lobe morphology [MP:0000801] <4>(7|8) (8|5|2)
0:   abnormal hippocampus morphology [MP:0000807] <12>(7|8) (8|5|2)
- 1:   abnormal hippocampus layer morphology [MP:0000813] <6>(4|4) (4|3|1)
- 1:   abnormal dentate gyrus morphology [MP:0000812] <4>(1|1) (1|1|0)
- 1:   abnormal hippocampus neuron morphology [MP:0009939] <4>(2|2) (2|2|1)
- 1:   abnormal hippocampus region morphology [MP:0008262] <4>(0|0) (0|0|0)
- 1:   abnormal Ammon gyrus morphology [MP:0000815] <3>(0|0) (0|0|0)
- 1:   abnormal hippocampal fimbria morphology [MP:0003005] <3>(1|1) (1|0|0)
- 1:   abnormal hippocampus size [MP:0008281] <2>(0|0) (0|0|0)
- 1:   abnormal hippocampal fornix morphology [MP:0003006](0|0) (0|0|0)
- 1:   abnormal hippocampal mossy fiber morphology [MP:0002761](2|2) (3|2|1)
- 1:   abnormal hippocampus development [MP:0000808](0|0) (0|0|0)
- 1:   abnormal subiculum morphology [MP:0008287](0|0) (0|0|0)
- 1:   absent hippocampus [MP:0000809](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Doublecortin (DC)0.00137Inherited
SH3-domain0.07314Inherited
Metallo-dependent hydrolases0.1027Inherited
Composite domain of metallo-dependent hydrolases0.1027Inherited
Sema domain0.2497Inherited
Plexin repeat0.3345Inherited
Homeodomain-like0.8789Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
beta-glycanases0.00005414Direct
Doublecortin (DC)0.00101Inherited
SH3-domain0.06694Inherited
Hydantoinase (dihydropyrimidinase)0.08603Inherited
Hydantoinase (dihydropyrimidinase), catalytic domain0.08603Inherited
Sema domain0.2315Inherited
Plexin repeat0.3169Inherited
Homeodomain0.7456Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Doublecortin (DC)0.0007641Direct
SH3-domain0.05372Inherited
Metallo-dependent hydrolases0.07772Inherited
Composite domain of metallo-dependent hydrolases0.07772Inherited
Sema domain0.2095Inherited
Plexin repeat0.2897Inherited
E set domains0.5395Inherited
Homeodomain-like0.8503Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
89837,89837
  • 89837 - Doublecortin (DC)
  • 89837 - Doublecortin (DC)
  • 0.0007641Direct
    51556,51338
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0.07772Inherited
    51338,51556
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
  • 0.07772Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.2095Inherited
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.31Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    51338,51556,51338
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 0.07772Inherited
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.31Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)