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Mammalian Phenotype (MP): abnormal hindbrain morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   mammalian phenotype [MP:0000001] <29>
+ + + 3:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ + 2:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
+ 1:   abnormal brain morphology [MP:0002152] <24>(25|42) (35|24|14)
0:   abnormal hindbrain morphology [MP:0000841] <7>(6|9) (7|12|7)
- 1:   abnormal fourth ventricle morphology [MP:0000828] <5>(0|0) (0|0|0)
- 1:   abnormal medulla oblongata morphology [MP:0000846] <5>(0|0) (0|0|0)
- 1:   abnormal metencephalon morphology [MP:0000847] <3>(6|9) (7|12|7)
- 1:   abnormal hindbrain size [MP:0012262] <2>(0|0) (0|0|0)
- 1:   hindbrain atrophy [MP:0014184] <1>(0|0) (0|0|0)
- 1:   abnormal pontine flexure morphology [MP:0000844](0|0) (0|0|0)
- 1:   absent hindbrain [MP:0012141](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cyclin-like0.04313Inherited
YWTD domain0.07852Inherited
Plexin repeat0.1444Inherited
Sema domain0.1592Inherited
Homeodomain-like0.227Inherited
GTPase activation domain, GAP0.3446Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
beta-glycanases0.0002233Direct
Bcl-2 inhibitors of programmed cell death0.01838Inherited
L domain0.04227Inherited
Cyclin0.05508Inherited
YWTD domain0.05877Inherited
POU-specific domain0.109Inherited
Plexin repeat0.1146Inherited
Homeodomain0.1183Inherited
Sema domain0.1275Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Bcl-2 inhibitors of programmed cell death0.01787Inherited
Cyclin-like0.03011Inherited
YWTD domain0.05787Inherited
Plexin repeat0.1137Inherited
Sema domain0.1268Inherited
Homeodomain-like0.1884Inherited
GTPase activation domain, GAP0.2993Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49562,48350
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48350 - GTPase activation domain, GAP
  • 0.0002149Direct
    57196,63825
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
  • 0.04142Inherited
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.04142Inherited
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.04142Inherited
    57184,63825
  • 57184 - Growth factor receptor domain
  • 63825 - YWTD domain
  • 0.04142Inherited
    57424,57184
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0.04142Inherited
    63825,57196
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
  • 0.05405Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.1075Inherited
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.1268Inherited
    57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.1567Inherited
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.1734Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.5116Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.0001883Direct
    57424,57424,57184
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0.04142Inherited
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.04142Inherited
    57424,57184,63825
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 63825 - YWTD domain
  • 0.04142Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.08735Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.1567Inherited
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.1734Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)