SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): abnormal cerebellum morphology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   mammalian phenotype [MP:0000001] <29>
+ + + + + 5:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ + + + 4:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
+ + + 3:   abnormal brain morphology [MP:0002152] <24>(25|42) (35|24|14)
+ + 2:   abnormal hindbrain morphology [MP:0000841] <7>(6|9) (7|12|7)
+ 1:   abnormal metencephalon morphology [MP:0000847] <3>(6|9) (7|12|7)
0:   abnormal cerebellum morphology [MP:0000849] <7>(6|8) (6|12|6)
- 1:   abnormal cerebellar cortex morphology [MP:0004097] <8>(5|6) (5|9|5)
- 1:   abnormal cerebellum development [MP:0000854] <4>(0|2) (0|2|1)
- 1:   abnormal cerebellum deep nucleus morphology [MP:0009979] <3>(0|0) (0|0|0)
- 1:   small cerebellum [MP:0000852] <2>(1|1) (1|0|0)
- 1:   abnormal cerebellum white matter morphology [MP:0009978] <1>(0|0) (0|0|0)
- 1:   absent cerebellum [MP:0000850](0|0) (1|0|0)
- 1:   enlarged cerebellum [MP:0008914](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
YWTD domain0.0007737Direct
Sema domain0.001078Inherited
Plexin repeat0.001163Inherited
Cyclin-like0.003444Inherited
GTPase activation domain, GAP0.1132Inherited
Homeodomain-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
beta-glycanases0.0001166Direct
YWTD domain0.0005154Direct
Sema domain0.0007531Direct
Plexin repeat0.0008308Direct
L domain0.002045Inherited
Cyclin0.01329Inherited
POU-specific domain0.03905Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
YWTD domain0.0004166Direct
Sema domain0.0005909Direct
Plexin repeat0.0006393Direct
Cyclin-like0.002013Inherited
GTPase activation domain, GAP0.08676Inherited
Homeodomain-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63825,57196
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
  • 0.0004129Direct
    101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.0005909Direct
    57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.0008724Direct
    57196,63825
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
  • 0.0008977Direct
    49562,48350
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48350 - GTPase activation domain, GAP
  • 0.001741Inherited
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.001741Inherited
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.001741Inherited
    57184,63825
  • 57184 - Growth factor receptor domain
  • 63825 - YWTD domain
  • 0.001741Inherited
    57424,57184
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0.001741Inherited
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.009283Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.05384Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.6862Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.00009683Direct
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.0006131Direct
    57424,57424,57184
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0.0008977Direct
    57424,57184,63825
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 63825 - YWTD domain
  • 0.0008977Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.001741Inherited
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.002427Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)