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Mammalian Phenotype (MP): abnormal retinal photoreceptor morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   vision/eye phenotype [MP:0005391] <2>(43|53) (50|27|17)
+ + + + + + + 7:   abnormal eye morphology [MP:0002092] <23>(39|49) (46|25|15)
+ + + + + + 6:   mammalian phenotype [MP:0000001] <29>
+ + + + + + 6:   abnormal posterior eye segment morphology [MP:0005195] <4>(21|24) (23|14|8)
+ + + + + 5:   abnormal ocular fundus morphology [MP:0002864] <2>(19|23) (21|14|8)
+ + + + 4:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ + + + 4:   abnormal retina morphology [MP:0001325] <23>(19|23) (21|14|8)
+ + + 3:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
+ + + 3:   abnormal retinal layer morphology [MP:0003727] <3>(11|16) (12|8|6)
+ + + 3:   abnormal somatic nervous system morphology [MP:0002752] <7>(34|47) (37|25|14)
+ + 2:   abnormal retinal neuronal layer morphology [MP:0006069] <7>(11|15) (11|8|5)
+ + 2:   abnormal somatic sensory system morphology [MP:0000959] <4>(26|38) (29|19|12)
+ + 2:   abnormal neuron morphology [MP:0002882] <29>(36|59) (40|26|19)
+ 1:   abnormal sensory neuron morphology [MP:0000965] <16>(16|28) (19|14|9)
+ 1:   abnormal retinal photoreceptor layer morphology [MP:0003728] <1>(4|7) (5|3|2)
0:   abnormal retinal photoreceptor morphology [MP:0001004] <8>(4|7) (5|3|2)
- 1:   abnormal photoreceptor inner segment morphology [MP:0003730] <6>(2|2) (2|1|1)
- 1:   abnormal photoreceptor outer segment morphology [MP:0003729] <6>(2|2) (2|0|1)
- 1:   abnormal retinal cone cell morphology [MP:0001006] <5>(0|1) (0|0|0)
- 1:   abnormal retinal rod cell morphology [MP:0001005] <5>(0|0) (0|0|0)
- 1:   decreased retinal photoreceptor cell number [MP:0001327] <2>(2|4) (3|2|1)
- 1:   increased retinal photoreceptor cell number [MP:0006070] <2>(0|0) (0|0|0)
- 1:   retinal photoreceptor degeneration [MP:0008450] <2>(2|2) (2|2|1)
- 1:   abnormal photoreceptor connecting cilium morphology [MP:0014059](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
GAF domain-like0.00007385Direct
Clc chloride channel0.0002615Direct
CBS-domain pair0.001585Inherited
HD-domain/PDEase-like0.005475Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Retinoblastoma tumor suppressor domains0Direct
GAF domain0.00004257Direct
Clc chloride channel0.0001576Direct
CBS-domain pair0.000768Direct
PDEase0.002614Inherited
Calmodulin-like0.04356Inherited
cAMP-binding domain0.1127Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GAF domain-like0.00003532Direct
Clc chloride channel0.0001337Direct
CBS-domain pair0.0008896Direct
HD-domain/PDEase-like0.003292Inherited
Cyclin-like0.008788Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55781,109604
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.00003532Direct
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 0.00003532Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.5945Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55781,55781,109604
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 109604 - HD-domain/PDEase-like
  • 0.00003532Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.5194Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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