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Mammalian Phenotype (MP): abnormal gastrulation

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   mammalian phenotype [MP:0000001] <29>
+ + + 3:   embryo phenotype [MP:0005380] <7>(40|54) (46|28|19)
+ + 2:   abnormal embryo development [MP:0001672] <5>(9|15) (11|11|5)
+ 1:   abnormal developmental patterning [MP:0002084] <7>(7|12) (9|9|3)
0:   abnormal gastrulation [MP:0001695] <5>(4|7) (6|4|2)
- 1:   abnormal embryo turning [MP:0001700] <4>(1|2) (1|0|0)
- 1:   abnormal germ layer development [MP:0001674] <3>(2|2) (3|1|1)
- 1:   abnormal gastrulation movements [MP:0002174](0|0) (0|0|0)
- 1:   delayed gastrulation [MP:0012105](0|0) (0|0|0)
- 1:   failure to gastrulate [MP:0001696](0|1) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SMAD MH1 domain0.000005771Direct
Cullin repeat-like0.0008091Direct
SMAD/FHA domain0.002346Inherited
Frizzled cysteine-rich domain0.4164Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SMAD MH1 domain0.000003421Direct
SMAD domain0.000003421Direct
Cullin repeat0.00005414Direct
C5 cytosine-specific DNA methylase, DCM0.00005414Direct
SCF ubiquitin ligase complex WHB domain0.0002111Direct
Extracellular domain of cell surface receptors0.00401Inherited
Frizzled cysteine-rich domain0.4019Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SMAD MH1 domain0.000002485Direct
Cullin repeat-like0.0004369Direct
Cullin homology domain0.0008595Direct
SMAD/FHA domain0.001342Inherited
FnI-like domain0.05548Inherited
Frizzled cysteine-rich domain0.3693Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0.0000441Direct
    75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0001764Direct
    52113,52113
  • 52113 - BRCT domain
  • 52113 - BRCT domain
  • 0.0008595Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.01922Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0000441Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.01922Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)