SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): abnormal hearing physiology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   hearing/vestibular/ear phenotype [MP:0005377] <2>(20|24) (23|14|5)
+ 1:   abnormal ear physiology [MP:0003878] <9>(8|8) (8|3|0)
0:   abnormal hearing physiology [MP:0001963] <5>(8|8) (8|2|0)
- 1:   abnormal hearing electrophysiology [MP:0006335] <7>(0|4) (0|0|0)
- 1:   impaired hearing [MP:0006325] <7>(5|4) (5|2|0)
- 1:   abnormal susceptibility to hearing loss [MP:0006334] <5>(1|1) (1|0|0)
- 1:   abnormal otoacoustic response [MP:0006336] <1>(3|3) (3|1|0)
- 1:   tinnitus [MP:0003741](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Phoshotransferase/anion transport protein0.0009448Direct
lambda repressor-like DNA-binding domains0.0298Inherited
Voltage-gated potassium channels0.03756Inherited
(Trans)glycosidases0.06468Inherited
Homeodomain-like0.06665Inherited
DEATH domain0.2033Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.6954Inherited
Nicotinic receptor ligand binding domain-like0.6954Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Clathrin adaptor core protein0.0005822Direct
Phosphotyrosine-binding domain (PTB)0.000656Direct
POU-specific domain0.006238Inherited
Voltage-gated potassium channels0.03515Inherited
Homeodomain0.08446Inherited
Nicotinic receptor ligand binding domain-like0.6718Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.6718Inherited
Motor proteins0.8674Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Phoshotransferase/anion transport protein0.0005135Direct
lambda repressor-like DNA-binding domains0.02026Inherited
Voltage-gated potassium channels0.02594Inherited
(Trans)glycosidases0.04692Inherited
Homeodomain-like0.04846Inherited
DEATH domain0.1663Inherited
Nicotinic receptor ligand binding domain-like0.6542Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.6542Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.01045Inherited
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.6542Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)