SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): postnatal lethality

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   mortality/aging [MP:0010768] <4>(83|115) (89|67|50)
+ + 2:   preweaning lethality [MP:0010770] <4>(48|79) (55|45|38)
+ 1:   abnormal survival [MP:0010769] <10>(60|91) (67|55|39)
+ 1:   lethality during fetal growth through weaning [MP:0010832] <5>(19|37) (23|28|22)
0:   postnatal lethality [MP:0002082] <2>(3|12) (6|7|5)
- 1:   postnatal lethality, complete penetrance [MP:0011085](0|2) (0|1|2)
- 1:   postnatal lethality, incomplete penetrance [MP:0011086](0|6) (3|3|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.00001521Direct
GAT-like domain0.0003229Direct
HLH, helix-loop-helix DNA-binding domain0.0004975Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Neurotrophin0Direct
Retinoblastoma tumor suppressor domains0Direct
RUNT domain0Direct
L domain0Direct
Paired domain0Direct
Homeodomain0.00008457Direct
HLH, helix-loop-helix DNA-binding domain0.0006698Direct
HMA, heavy metal-associated domain0.004871Inherited
ZZ domain0.02548Inherited
DNA replication initiator (cdc21/cdc54) N-terminal domain0.02548Inherited
Adenosine/AMP deaminase0.0409Inherited
E2F dimerization segment0.0531Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000006749Direct
GAT-like domain0.0001673Direct
HLH, helix-loop-helix DNA-binding domain0.0002627Direct
HMA, heavy metal-associated domain0.003789Inherited
Orange domain-like0.01433Inherited
E2F-DP heterodimerization region0.09026Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52058,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0Direct
    54236,57889
  • 54236 - Ubiquitin-like
  • 57889 - Cysteine-rich domain
  • 0Direct
    48464,89009
  • 48464 - ENTH/VHS domain
  • 89009 - GAT-like domain
  • 0.0001673Direct
    47459,158457
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 158457 - Orange domain-like
  • 0.01433Inherited
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0.09026Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    54928,54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0Direct
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0Direct
    57184,52058,49265
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 0Direct
    52058,49265,49265
  • 52058 - L domain-like
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)