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Mammalian Phenotype (MP): abnormal lymph organ size

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   mammalian phenotype [MP:0000001] <29>
+ + + 3:   immune system phenotype [MP:0005387] <2>(76|114) (86|66|35)
+ + 2:   abnormal immune system morphology [MP:0000685] <3>(50|76) (60|35|18)
+ 1:   abnormal immune system organ morphology [MP:0002722] <8>(21|31) (26|15|9)
0:   abnormal lymph organ size [MP:0002221] <5>(7|16) (10|10|5)
- 1:   abnormal spleen size [MP:0002224] <3>(2|7) (5|4|4)
- 1:   abnormal thymus size [MP:0002364] <3>(1|5) (1|6|1)
- 1:   abnormal lymph node size [MP:0000701] <2>(7|8) (8|3|0)
- 1:   large lymphoid organs [MP:0002220] <1>(0|0) (0|0|0)
- 1:   small lymphoid organs [MP:0000687] <1>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
CCCH zinc finger0.009782Inherited
Inhibitor of apoptosis (IAP) repeat0.0275Inherited
Complement control module/SCR domain0.1441Inherited
TNF-like0.2892Inherited
Bcl-2 inhibitors of programmed cell death0.352Inherited
TNF receptor-like0.5284Inherited
DEATH domain0.847Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Notch domain0.005615Inherited
Nuclear receptor coactivator interlocking domain0.005615Inherited
CCCH zinc finger0.007625Inherited
Linker histone H1/H50.01027Inherited
Inhibitor of apoptosis (IAP) repeat0.01226Inherited
E2F dimerization segment0.01226Inherited
Hypoxia-inducible factor Hif2a, C-terminal domain0.05633Inherited
Complement control module/SCR domain0.1282Inherited
Phoshoinositide 3-kinase (PI3K), catalytic domain0.1873Inherited
Rel/Dorsal transcription factors, DNA-binding domain0.2258Inherited
TNF-like0.2733Inherited
Bcl-2 inhibitors of programmed cell death0.329Inherited
TNF receptor-like0.3628Inherited
Pyrin domain, PYD0.6831Inherited
Interferon regulatory factor0.76Inherited
DEATH domain, DD0.8921Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nuclear receptor coactivator interlocking domain0.004667Inherited
Notch domain0.004667Inherited
CCCH zinc finger0.006101Inherited
Inhibitor of apoptosis (IAP) repeat0.01854Inherited
Complement control module/SCR domain0.1135Inherited
TNF-like0.2465Inherited
Bcl-2 inhibitors of programmed cell death0.3066Inherited
vWA-like0.4449Inherited
TNF receptor-like0.4812Inherited
DEATH domain0.8155Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54236,57889
  • 54236 - Ubiquitin-like
  • 57889 - Cysteine-rich domain
  • 0Direct
    50729,55550
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 0.0009081Direct
    57196,90193
  • 57196 - EGF/Laminin
  • 90193 - Notch domain
  • 0.001367Inherited
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.01033Inherited
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.1808Inherited
    49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
  • 0.2066Inherited
    57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.2066Inherited
    57716,48508
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 48508 - Nuclear receptor ligand-binding domain
  • 0.6041Inherited
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.659Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.7898Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    55550,56112,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 56112 - Protein kinase-like (PK-like)
  • 0.001367Inherited
    50729,55550,56112
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.001367Inherited
    57586,57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.004667Inherited
    57184,57196,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.3066Inherited
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.334Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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