SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): abnormal respiratory function

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   mammalian phenotype [MP:0000001] <29>
+ + + 3:   respiratory system phenotype [MP:0005388] <2>(33|46) (36|29|15)
+ + 2:   abnormal respiratory system physiology [MP:0002133] <23>(15|21) (16|13|7)
+ 1:   abnormal respiration [MP:0001943] <6>(12|15) (13|9|6)
0:   abnormal respiratory function [MP:0002327] <4>(10|11) (10|7|5)
- 1:   abnormal breathing pattern [MP:0001951] <5>(5|7) (5|5|5)
- 1:   abnormal airway resistance [MP:0002328] <2>(0|0) (0|0|0)
- 1:   abnormal bronchial provocation [MP:0002330] <1>(5|4) (5|2|0)
- 1:   abnormal forced expiratory flow rates [MP:0002297](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Kringle-like0.006013Inherited
Toll/Interleukin receptor TIR domain0.09272Inherited
HLH, helix-loop-helix DNA-binding domain0.2163Inherited
Family A G protein-coupled receptor-like0.2423Inherited
Voltage-gated potassium channels0.2695Inherited
DEATH domain0.2721Inherited
L27 domain0.3396Inherited
TNF receptor-like0.4235Inherited
4-helical cytokines0.5213Inherited
FnI-like domain0.6452Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Retinoblastoma tumor suppressor domains0Direct
Hypoxia-inducible factor Hif2a, C-terminal domain0.003763Inherited
Kringle modules0.003763Inherited
DEATH domain, DD0.04693Inherited
Toll/Interleukin receptor TIR domain0.07353Inherited
Rhodopsin-like0.1747Inherited
HLH, helix-loop-helix DNA-binding domain0.1876Inherited
Forkhead DNA-binding domain0.2369Inherited
L27 domain0.3038Inherited
TNF receptor-like0.3864Inherited
L domain0.5701Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Kringle-like0.003631Inherited
Toll/Interleukin receptor TIR domain0.06948Inherited
HLH, helix-loop-helix DNA-binding domain0.1783Inherited
Family A G protein-coupled receptor-like0.2027Inherited
Voltage-gated potassium channels0.228Inherited
DEATH domain0.2303Inherited
L27 domain0.2946Inherited
TNF receptor-like0.3766Inherited
4-helical cytokines0.4738Inherited
FnI-like domain0.6015Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.004038Inherited
    57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.01084Inherited
    57184,57196
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.2303Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.3323Inherited
    101288,50156
  • 101288 - L27 domain
  • 50156 - PDZ domain-like
  • 0.3766Inherited
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.5592Inherited
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.5592Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,57196,57184
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0007843Direct
    49899,49899,49899
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 49899 - Concanavalin A-like lectins/glucanases
  • 0.0009551Direct
    57184,57184,57196
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.001521Inherited
    47459,55785,55785
  • 47459 - HLH, helix-loop-helix DNA-binding domain
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
  • 0.002601Inherited
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.5592Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)