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Mammalian Phenotype (MP): abnormal long bone morphology

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   mammalian phenotype [MP:0000001] <29>
+ + + 3:   skeleton phenotype [MP:0005390] <2>(46|63) (50|41|26)
+ + 2:   abnormal skeleton morphology [MP:0005508] <15>(41|59) (47|38|25)
+ 1:   abnormal appendicular skeleton morphology [MP:0009250] <4>(12|17) (17|12|13)
0:   abnormal long bone morphology [MP:0003723] <11>(7|13) (11|11|11)
- 1:   abnormal limb long bone morphology [MP:0011504] <10>(5|9) (7|7|7)
- 1:   decreased length of long bones [MP:0004686] <9>(2|3) (2|2|1)
- 1:   increased length of long bones [MP:0004695] <8>(0|0) (0|0|0)
- 1:   abnormal long bone epiphyseal plate morphology [MP:0003055] <6>(2|4) (2|4|2)
- 1:   decreased diameter of long bones [MP:0008150] <6>(0|0) (0|0|0)
- 1:   increased diameter of long bones [MP:0008151] <6>(0|0) (0|0|0)
- 1:   abnormal clavicle morphology [MP:0005298] <2>(1|2) (2|0|0)
- 1:   abnormal long bone epiphysis morphology [MP:0000131] <2>(0|0) (0|0|0)
- 1:   abnormal long bone internal diameter [MP:0013619] <2>(0|0) (0|0|0)
- 1:   abnormal long bone diaphysis morphology [MP:0004214](0|0) (0|0|0)
- 1:   abnormal long bone metaphysis morphology [MP:0000133](0|0) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
(Trans)glycosidases0.0002904Direct
PGBD-like0.00631Inherited
YWTD domain0.04748Inherited
TIMP-like0.3737Inherited
Metalloproteases ("zincins"), catalytic domain0.444Inherited
HLH, helix-loop-helix DNA-binding domain0.9417Inherited
Homeodomain-like1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Retinoblastoma tumor suppressor domains0Direct
Arylsulfatase0.001082Inherited
Classic zinc finger, C2H20.001738Inherited
Hemopexin-like domain0.001991Inherited
Fibroblast growth factors (FGF)0.002597Inherited
MMP N-terminal domain0.004636Inherited
Matrix metalloproteases, catalytic domain0.005979Inherited
Rel/Dorsal transcription factors, DNA-binding domain0.01352Inherited
YWTD domain0.03753Inherited
Transforming growth factor (TGF)-beta0.4851Inherited
VWC domain0.5241Inherited
HLH, helix-loop-helix DNA-binding domain0.9159Inherited
Homeodomain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
(Trans)glycosidases0.0001492Direct
Hemopexin-like domain0.001604Inherited
beta-beta-alpha zinc fingers0.003664Inherited
PGBD-like0.003834Inherited
YWTD domain0.03346Inherited
LDL receptor-like module0.04869Inherited
TIMP-like0.3277Inherited
Metalloproteases ("zincins"), catalytic domain0.3964Inherited
Spermadhesin, CUB domain0.5528Inherited
HLH, helix-loop-helix DNA-binding domain0.9193Inherited
Homeodomain-like1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57184,57581
  • 57184 - Growth factor receptor domain
  • 57581 - TB module/8-cys domain
  • 0Direct
    57196,57581
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 0.00007712Direct
    57581,57196
  • 57581 - TB module/8-cys domain
  • 57196 - EGF/Laminin
  • 0.00007712Direct
    63501,50242
  • 63501 - Frizzled cysteine-rich domain
  • 50242 - TIMP-like
  • 0.0007133Direct
    57196,63825
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
  • 0.001688Inherited
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.003834Inherited
    63825,57196
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
  • 0.008255Inherited
    57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.01155Inherited
    49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
  • 0.01175Inherited
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.04859Inherited
    57196,57184
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.5299Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,57184,57581
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 57581 - TB module/8-cys domain
  • 0Direct
    57581,57196,57196
  • 57581 - TB module/8-cys domain
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00001631Direct
    57196,57196,57581
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 0.00001631Direct
    57196,57581,57184
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 57184 - Growth factor receptor domain
  • 0.0001911Direct
    57581,57196,57581
  • 57581 - TB module/8-cys domain
  • 57196 - EGF/Laminin
  • 57581 - TB module/8-cys domain
  • 0.0007133Direct
    63825,57196,63825
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
  • 0.001688Inherited
    57196,63825,57196
  • 57196 - EGF/Laminin
  • 63825 - YWTD domain
  • 57196 - EGF/Laminin
  • 0.001688Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.009045Inherited
    57196,57184,57196
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 57196 - EGF/Laminin
  • 0.01609Inherited
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0.04066Inherited
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.4012Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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