SUPERFAMILY 1.75 HMM library and genome assignments server

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Mammalian Phenotype (MP): abnormal immune organ physiology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   immune system phenotype [MP:0005387] <2>(76|114) (86|66|35)
+ 1:   abnormal immune system physiology [MP:0001790] <16>(59|84) (66|49|28)
0:   abnormal immune organ physiology [MP:0003762] <4>(3|5) (3|1|0)
- 1:   abnormal thymus physiology [MP:0003763] <4>(1|2) (1|1|0)
- 1:   abnormal gut-associated lymphoid tissue physiology [MP:0014047] <1>(0|0) (0|0|0)
- 1:   abnormal spleen physiology [MP:0008737] <1>(2|3) (2|0|0)
- 1:   lymph node inflammation [MP:0003865](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Caspase-like0.000004531Direct
Bcl-2 inhibitors of programmed cell death0.01261Inherited
Toll/Interleukin receptor TIR domain0.1128Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Caspase catalytic domain0.0000006043Direct
Bcl-2 inhibitors of programmed cell death0.008851Inherited
Short-chain cytokines0.01159Inherited
Caspase recruitment domain, CARD0.05045Inherited
Toll/Interleukin receptor TIR domain0.1957Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Caspase-like0.000001933Direct
Bcl-2 inhibitors of programmed cell death0.008009Inherited
Toll/Interleukin receptor TIR domain0.08647Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47986,52129
  • 47986 - DEATH domain
  • 52129 - Caspase-like
  • 0.0002776Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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