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Mammalian Phenotype (MP): abnormal muscle fiber morphology

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   muscle phenotype [MP:0005369] <2>(49|57) (54|37|28)
+ 1:   abnormal muscle morphology [MP:0002108] <16>(28|31) (31|22|21)
0:   abnormal muscle fiber morphology [MP:0004087] <7>(4|6) (5|7|6)
- 1:   abnormal myocardial fiber morphology [MP:0000278] <7>(0|0) (0|0|0)
- 1:   abnormal skeletal muscle fiber morphology [MP:0003084] <7>(3|4) (3|2|2)
- 1:   abnormal Z lines [MP:0004091] <2>(0|0) (0|0|0)
- 1:   abnormal M lines [MP:0004094] <1>(0|0) (0|0|0)
- 1:   abnormal sarcoplasmic reticulum morphology [MP:0004088] <1>(0|0) (0|0|0)
- 1:   abnormal sarcolemma morphology [MP:0004121](0|0) (0|0|0)
- 1:   abnormal sarcomere morphology [MP:0004090](0|1) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
alpha-catenin/vinculin-like0.0001477Direct
B-box zinc-binding domain0.04196Inherited
Actin-like ATPase domain0.07339Inherited
HLH, helix-loop-helix DNA-binding domain0.5196Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Plakin repeat0.000992Direct
ZZ domain0.003261Inherited
28-residue LRR0.03119Inherited
B-box zinc-binding domain0.03231Inherited
Laminin-type module0.1524Inherited
HLH, helix-loop-helix DNA-binding domain0.5021Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
alpha-catenin/vinculin-like0.00007364Direct
Plakin repeat0.0007431Direct
B-box zinc-binding domain0.02924Inherited
Actin-like ATPase domain0.05387Inherited
HLH, helix-loop-helix DNA-binding domain0.4721Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.00007364Direct
    75399,75399
  • 75399 - Plakin repeat
  • 75399 - Plakin repeat
  • 0.0003073Direct
    47473,57850
  • 47473 - EF-hand
  • 57850 - RING/U-box
  • 0.0003073Direct
    48726,56112
  • 48726 - Immunoglobulin
  • 56112 - Protein kinase-like (PK-like)
  • 0.0003073Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.0007431Direct
    57850,57845
  • 57850 - RING/U-box
  • 57845 - B-box zinc-binding domain
  • 0.02924Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.2743Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    47220,47220,47220
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 47220 - alpha-catenin/vinculin-like
  • 0.00002509Direct
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00007343Direct
    48726,49265,48726
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.00007871Direct
    47473,47473,57850
  • 47473 - EF-hand
  • 47473 - EF-hand
  • 57850 - RING/U-box
  • 0.0003073Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.05387Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.1689Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)