SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): abnormal cerebellar cortex morphology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   mammalian phenotype [MP:0000001] <29>
+ + + + + + 6:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ + + + + 5:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
+ + + + 4:   abnormal brain morphology [MP:0002152] <24>(25|42) (35|24|14)
+ + + 3:   abnormal hindbrain morphology [MP:0000841] <7>(6|9) (7|12|7)
+ + 2:   abnormal metencephalon morphology [MP:0000847] <3>(6|9) (7|12|7)
+ 1:   abnormal cerebellum morphology [MP:0000849] <7>(6|8) (6|12|6)
0:   abnormal cerebellar cortex morphology [MP:0004097] <8>(5|6) (5|9|5)
- 1:   abnormal cerebellar hemisphere morphology [MP:0009959] <5>(0|0) (0|0|0)
- 1:   abnormal cerebellum vermis morphology [MP:0000864] <5>(0|0) (0|0|0)
- 1:   abnormal cerebellum lobule morphology [MP:0009964] <4>(1|2) (1|2|1)
- 1:   abnormal cerebellar layer morphology [MP:0009956] <3>(4|4) (4|6|3)
- 1:   abnormal cerebellum anterior lobe morphology [MP:0009960] <1>(0|0) (0|0|0)
- 1:   abnormal cerebellum fissure morphology [MP:0009267] <1>(0|0) (0|0|0)
- 1:   abnormal cerebellum posterior lobe morphology [MP:0009962] <1>(1|1) (1|0|0)
- 1:   abnormal flocculonodular lobe morphology [MP:0009961] <1>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Plexin repeat0.0002905Direct
Sema domain0.0003049Direct
Cyclin-like0.00119Inherited
GTPase activation domain, GAP0.05531Inherited
Homeodomain-like0.7742Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Plexin repeat0.0002058Direct
Sema domain0.0002106Direct
L domain0.001034Inherited
Cyclin0.006358Inherited
POU-specific domain0.02228Inherited
Homeodomain0.4691Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Plexin repeat0.0001493Direct
Sema domain0.0001569Direct
Cyclin-like0.0006553Direct
GTPase activation domain, GAP0.03943Inherited
Homeodomain-like0.7374Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.0001569Direct
    49562,48350
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48350 - GTPase activation domain, GAP
  • 0.0008674Direct
    52058,57184
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.0008674Direct
    57184,52058
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0008674Direct
    57184,63825
  • 57184 - Growth factor receptor domain
  • 63825 - YWTD domain
  • 0.0008674Direct
    57424,57184
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0.0008674Direct
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.004264Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.03079Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.06686Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57184,52058,57184
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 0.00004462Direct
    57424,57424,57184
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 0.0004414Direct
    57424,57184,63825
  • 57424 - LDL receptor-like module
  • 57184 - Growth factor receptor domain
  • 63825 - YWTD domain
  • 0.0004414Direct
    52058,57184,52058
  • 52058 - L domain-like
  • 57184 - Growth factor receptor domain
  • 52058 - L domain-like
  • 0.0008674Direct
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.001051Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)