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Mammalian Phenotype (MP): abnormal basal ganglion morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   mammalian phenotype [MP:0000001] <29>
+ + + + 4:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ + + 3:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
+ + 2:   abnormal brain morphology [MP:0002152] <24>(25|42) (35|24|14)
+ 1:   abnormal forebrain morphology [MP:0000783] <8>(18|26) (24|15|8)
0:   abnormal basal ganglion morphology [MP:0006007] <5>(2|4) (2|0|0)
- 1:   abnormal striatum morphology [MP:0004077] <5>(1|2) (1|0|0)
- 1:   abnormal substantia nigra morphology [MP:0000836] <2>(1|2) (1|0|0)
- 1:   abnormal globus pallidus morphology [MP:0004081](0|0) (0|0|0)
- 1:   abnormal subthalamic nucleus morphology [MP:0000835](0|0) (0|0|0)
- 1:   loss of basal ganglia neurons [MP:0003242](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SAP domain0.000906Direct
Nuclear receptor ligand-binding domain0.04405Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
beta-glycanases0.000001405Direct
SAP domain0.0005595Direct
Nuclear receptor ligand-binding domain0.02906Inherited
Nuclear receptor0.02906Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SAP domain0.0004921Direct
Nuclear receptor ligand-binding domain0.03079Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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