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Mammalian Phenotype (MP): abnormal T cell morphology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   mammalian phenotype [MP:0000001] <29>
+ + + + + + 6:   immune system phenotype [MP:0005387] <2>(76|114) (86|66|35)
+ + + + + + 6:   hematopoietic system phenotype [MP:0005397] <2>(72|102) (78|63|30)
+ + + + + 5:   abnormal immune system morphology [MP:0000685] <3>(51|76) (60|35|18)
+ + + + + 5:   abnormal hematopoietic system morphology/development [MP:0002396] <5>(58|86) (66|47|21)
+ + + + 4:   abnormal immune system cell morphology [MP:0000716] <5>(38|63) (48|29|16)
+ + + + 4:   abnormal hematopoietic cell morphology [MP:0013656] <9>(49|77) (60|43|18)
+ + + 3:   abnormal leukocyte morphology [MP:0008246] <4>(37|62) (47|29|15)
+ + 2:   abnormal mononuclear cell morphology [MP:0008247] <2>(34|57) (41|28|14)
+ 1:   abnormal lymphocyte morphology [MP:0002619] <5>(28|46) (33|26|14)
0:   abnormal T cell morphology [MP:0008037] <9>(14|25) (18|19|11)
- 1:   abnormal alpha-beta T cell morphology [MP:0012762] <13>(7|17) (8|14|6)
- 1:   abnormal T cell number [MP:0006387] <11>(8|22) (16|15|7)
- 1:   abnormal T cell differentiation [MP:0002145] <9>(8|9) (10|8|3)
- 1:   abnormal effector T cell morphology [MP:0002435] <7>(7|16) (8|13|6)
- 1:   abnormal gamma-delta T cell morphology [MP:0008343] <3>(0|0) (0|2|1)
- 1:   abnormal intraepithelial T cell morphology [MP:0008894] <3>(0|0) (0|0|0)
- 1:   abnormal memory T cell morphology [MP:0010833] <3>(0|0) (0|0|0)
- 1:   abnormal regulatory T cell morphology [MP:0004941] <3>(0|0) (0|0|0)
- 1:   abnormal NK T cell morphology [MP:0008036] <1>(0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
STAT0Direct
Transcription factor STAT-4 N-domain0Direct
p53-like transcription factors0.000000001753Direct
MHC antigen-recognition domain0.00004074Direct
Bcl-2 inhibitors of programmed cell death0.001968Inherited
Integrin domains0.002929Inherited
E2F-DP heterodimerization region0.003994Inherited
Integrin alpha N-terminal domain0.005977Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.006268Inherited
SH2 domain0.3603Inherited
SH3-domain0.3928Inherited
DEATH domain0.8324Inherited
Cysteine-rich domain0.8727Inherited
TNF receptor-like0.9365Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
STAT DNA-binding domain0Direct
RUNT domain0Direct
Transcription factor STAT-4 N-domain0Direct
STAT0Direct
Interleukin 17F, IL-17F0Direct
Rel/Dorsal transcription factors, DNA-binding domain0.0000008244Direct
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain0.000005742Direct
MHC antigen-recognition domain0.0000269Direct
Phoshoinositide 3-kinase (PI3K), catalytic domain0.00002984Direct
E2F dimerization segment0.001083Inherited
Bcl-2 inhibitors of programmed cell death0.001353Inherited
Interferon regulatory factor0.001353Inherited
Integrin domains0.002165Inherited
Phoshoinositide 3-kinase (PI3K) helical domain0.002783Inherited
Nuclear receptor coactivator interlocking domain0.005407Inherited
Cell cycle transcription factor e2f-dp0.009834Inherited
C1 set domains (antibody constant domain-like)0.03708Inherited
SH2 domain0.3124Inherited
SH3-domain0.3461Inherited
V set domains (antibody variable domain-like)0.4264Inherited
TNF receptor-like0.6031Inherited
Pointed domain0.6777Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.7248Inherited
ets domain0.7853Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
STAT0Direct
Transcription factor STAT-4 N-domain0Direct
p53-like transcription factors0.0000000006544Direct
MHC antigen-recognition domain0.00001897Direct
Bcl-2 inhibitors of programmed cell death0.001118Inherited
Integrin domains0.001696Inherited
beta-beta-alpha zinc fingers0.002132Inherited
E2F-DP heterodimerization region0.002356Inherited
Integrin alpha N-terminal domain0.003609Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.003807Inherited
Nuclear receptor coactivator interlocking domain0.004686Inherited
Protein kinase-like (PK-like)0.09472Inherited
SH2 domain0.3146Inherited
SH3-domain0.3462Inherited
Acyl-CoA N-acyltransferases (Nat)0.431Inherited
DEATH domain0.8Inherited
Cysteine-rich domain0.8434Inherited
TNF receptor-like0.9134Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48092,47655
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 0Direct
    49417,55550
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0Direct
    47655,49417
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0Direct
    47576,48065
  • 47576 - Calponin-homology domain, CH-domain
  • 48065 - DBL homology domain (DH-domain)
  • 0Direct
    49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
  • 0.0000005523Direct
    54452,48726
  • 54452 - MHC antigen-recognition domain
  • 48726 - Immunoglobulin
  • 0.000001819Direct
    50729,56112
  • 50729 - PH domain-like
  • 56112 - Protein kinase-like (PK-like)
  • 0.00002657Direct
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0.002356Inherited
    49562,48371
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 0.002356Inherited
    69318,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.002828Inherited
    69179,69179
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.002828Inherited
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.008078Inherited
    48371,56112
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.008447Inherited
    53300,69318
  • 53300 - vWA-like
  • 69318 - Integrin alpha N-terminal domain
  • 0.02931Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.09714Inherited
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.2473Inherited
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.2791Inherited
    55550,55550
  • 55550 - SH2 domain
  • 55550 - SH2 domain
  • 0.5836Inherited
    47986,47986
  • 47986 - DEATH domain
  • 47986 - DEATH domain
  • 0.6751Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48092,47655,49417
  • 48092 - Transcription factor STAT-4 N-domain
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 0Direct
    47655,49417,55550
  • 47655 - STAT
  • 49417 - p53-like transcription factors
  • 55550 - SH2 domain
  • 0Direct
    55550,56112,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    50729,55550,56112
  • 50729 - PH domain-like
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0Direct
    50044,55550,50044
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0Direct
    47576,48065,50729
  • 47576 - Calponin-homology domain, CH-domain
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0Direct
    57196,57196,57184
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57184 - Growth factor receptor domain
  • 0.0002329Direct
    49562,48371,56112
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 48371 - ARM repeat
  • 56112 - Protein kinase-like (PK-like)
  • 0.002356Inherited
    69318,69179,69179
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 69179 - Integrin domains
  • 0.002828Inherited
    53300,69318,69179
  • 53300 - vWA-like
  • 69318 - Integrin alpha N-terminal domain
  • 69179 - Integrin domains
  • 0.02931Inherited
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.3007Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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