SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Mammalian Phenotype (MP): abnormal spinal cord dorsal column morphology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   mammalian phenotype [MP:0000001] <29>
+ + + + 4:   nervous system phenotype [MP:0003631] <2>(98|128) (113|79|50)
+ + + 3:   abnormal nervous system morphology [MP:0003632] <17>(76|104) (91|64|47)
+ + 2:   abnormal spinal cord morphology [MP:0000955] <13>(7|9) (8|4|3)
+ 1:   abnormal spinal cord white matter morphology [MP:0008027] <3>(3|5) (5|1|0)
0:   abnormal spinal cord dorsal column morphology [MP:0009677](2|2) (3|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
p53-like transcription factors0.000002921Direct
Galactose-binding domain-like0.0002172Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Rel/Dorsal transcription factors, DNA-binding domain0.0000002069Direct
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain0.0000008959Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
p53-like transcription factors0.000001231Direct
Galactose-binding domain-like0.0001103Direct
SH2 domain0.0007663Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
49417,81296
  • 49417 - p53-like transcription factors
  • 81296 - E set domains
  • 0.0000001266Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)