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Mammalian Phenotype (MP): abnormal intestine physiology

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Root: MP Hierarchy (mammalian/mouse phenotype from MGI_4.41)

Shortest distance to current term (+ for parents, - for children) MP term [MP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   mammalian phenotype [MP:0000001] <29>
+ + 2:   digestive/alimentary phenotype [MP:0005381] <2>(38|46) (40|19|9)
+ 1:   abnormal digestive system physiology [MP:0001663] <18>(16|16) (17|7|5)
0:   abnormal intestine physiology [MP:0010155] <4>(9|10) (9|6|4)
- 1:   abnormal intestinal epithelium physiology [MP:0014201] <4>(2|1) (2|1|0)
- 1:   intestinal inflammation [MP:0001858] <2>(8|9) (8|3|2)
- 1:   abnormal intestine regeneration [MP:0003380](0|0) (0|0|0)
- 1:   intestinal edema [MP:0003288](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
N-acetylmuramoyl-L-alanine amidase-like0Direct
Toll/Interleukin receptor TIR domain0.00003189Direct
DEATH domain0.003019Inherited
RNI-like0.004257Inherited
Nuclear receptor ligand-binding domain0.01487Inherited
Rhodanese/Cell cycle control phosphatase0.02027Inherited
4-helical cytokines0.07443Inherited
Ferredoxin reductase-like, C-terminal NADP-linked domain0.1682Inherited
Riboflavin synthase domain-like0.1682Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
N-acetylmuramoyl-L-alanine amidase-like0Direct
Interleukin 17F, IL-17F0.000002371Direct
Pyrin domain, PYD0.00003474Direct
Interferons/interleukin-10 (IL-10)0.0001556Direct
Toll/Interleukin receptor TIR domain0.0002113Direct
Nuclear receptor0.0006399Direct
28-residue LRR0.00244Inherited
Cell cycle control phosphatase, catalytic domain0.004624Inherited
Nuclear receptor ligand-binding domain0.01292Inherited
Caspase recruitment domain, CARD0.01539Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
N-acetylmuramoyl-L-alanine amidase-like0Direct
Toll/Interleukin receptor TIR domain0.00001466Direct
DEATH domain0.001751Inherited
RNI-like0.002521Inherited
Nuclear receptor ligand-binding domain0.009534Inherited
Rhodanese/Cell cycle control phosphatase0.01331Inherited
4-helical cytokines0.05471Inherited
Riboflavin synthase domain-like0.1345Inherited
Ferredoxin reductase-like, C-terminal NADP-linked domain0.1345Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47986,52540
  • 47986 - DEATH domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00004743Direct
    52540,90123
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.0005599Direct
    52058,52058
  • 52058 - L domain-like
  • 52058 - L domain-like
  • 0.00092Direct
    51045,51045
  • 51045 - WW domain
  • 51045 - WW domain
  • 0.005717Inherited
    57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.1345Inherited
    57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.1345Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57440,57440,57440
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 57440 - Kringle-like
  • 0.0001124Direct
    57586,57586,57586
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 57586 - TNF receptor-like
  • 0.0001124Direct
    52540,90123,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0005599Direct
    90123,52540,90123
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.0005599Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)