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Worm Phenotype (WP): organism stress response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + + 3:   organism physiology variant [WBPhenotype:0000576] <11>(366|425) (369|192|56)
+ + 2:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(358|416) (360|189|55)
+ 1:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(128|115) (130|52|16)
0:   organism stress response variant [WBPhenotype:0000067] <16>(56|46) (56|18|5)
- 1:   cell stress response variant [WBPhenotype:0000142] <14>(36|30) (36|10|3)
- 1:   organism temperature response variant [WBPhenotype:0000146] <9>(9|9) (9|2|0)
- 1:   organism starvation response variant [WBPhenotype:0000147] <5>(3|2) (3|1|0)
- 1:   organism ionizing radiation response variant [WBPhenotype:0000686] <4>(12|5) (12|0|0)
- 1:   organism UV response variant [WBPhenotype:0000143] <3>(6|6) (6|4|2)
- 1:   organism heat response variant [WBPhenotype:0001273] <3>(7|6) (7|3|1)
- 1:   methyl methanesulfonate response variant [WBPhenotype:0000498] <1>(0|0) (0|0|0)
- 1:   organism crowding response variant [WBPhenotype:0000191] <1>(0|0) (0|0|0)
- 1:   organism desiccation response variant [WBPhenotype:0001417] <1>(0|0) (0|0|0)
- 1:   rhythmic tolerance to stress variant [WBPhenotype:0001709] <1>(0|0) (0|0|0)
- 1:   stress induced lethality variant [WBPhenotype:0000139] <1>(2|2) (2|0|0)
- 1:   ethyl methanesulfonate response variant [WBPhenotype:0000499](0|0) (0|0|0)
- 1:   organism electrophilic stress hypersensitive [WBPhenotype:0001634](2|2) (2|1|0)
- 1:   organism hypersensitive interstrand cross link agents [WBPhenotype:0001796](0|0) (0|0|0)
- 1:   organism response to pH variant [WBPhenotype:0001732](0|0) (0|0|0)
- 1:   stress induced arrest variant [WBPhenotype:0000140](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RBP11-like subunits of RNA polymerase0Direct
Heme-dependent catalase-like0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
5' to 3' exonuclease, C-terminal subdomain0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
GST C-terminal domain-like0.000000004339Direct
PIN domain-like0.000001747Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.000002496Direct
F1F0 ATP synthase subunit C0.00002496Direct
ARID-like0.00002496Direct
Thioredoxin-like0.00003058Direct
Di-copper centre-containing domain0.0001311Direct
PLC-like phosphodiesterases0.0002135Direct
NAD kinase/diacylglycerol kinase-like0.0003239Direct
Sec63 N-terminal domain-like0.001053Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.002235Inherited
Ankyrin repeat0.002372Inherited
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.00276Inherited
Cysteine-rich domain0.004148Inherited
ACP-like0.005632Inherited
Bromodomain0.005775Inherited
RING/U-box0.00593Inherited
Periplasmic binding protein-like II0.01281Inherited
Chromo domain-like0.01973Inherited
GroEL equatorial domain-like0.02562Inherited
GroEL-intermediate domain like0.02562Inherited
GroEL apical domain-like0.02562Inherited
HD-domain/PDEase-like0.02847Inherited
HRDC-like0.06236Inherited
Arginase/deacetylase0.06236Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.06613Inherited
"Winged helix" DNA-binding domain0.09566Inherited
Sm-like ribonucleoproteins0.09639Inherited
Hect, E3 ligase catalytic domain0.09639Inherited
BRCT domain0.1126Inherited
cAMP-binding domain-like0.1167Inherited
P-loop containing nucleoside triphosphate hydrolases0.1587Inherited
FYVE/PHD zinc finger0.1964Inherited
Periplasmic binding protein-like I0.2995Inherited
PLP-dependent transferases0.3069Inherited
PH domain-like0.3947Inherited
Saposin0.4452Inherited
S-adenosyl-L-methionine-dependent methyltransferases0.4762Inherited
Cysteine proteinases0.5018Inherited
Lipocalins0.6004Inherited
Protein kinase-like (PK-like)0.6653Inherited
RNA-binding domain, RBD0.7182Inherited
E set domains0.7391Inherited
Insulin-like0.7639Inherited
EF-hand0.8708Inherited
Nucleotidylyl transferase0.9008Inherited
Metallo-dependent phosphatases0.9135Inherited
MFS general substrate transporter0.9928Inherited
Neurotransmitter-gated ion-channel transmembrane pore1Inherited
Nicotinic receptor ligand binding domain-like1Inherited
Histone-fold1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
5' to 3' exonuclease catalytic domain0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
5' to 3' exonuclease, C-terminal subdomain0Direct
RNA-polymerase beta0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Arginine methyltransferase0Direct
Heme-dependent catalases0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Mammalian PLC0Direct
Tandem AAA-ATPase domain0.00000000049Direct
PLC-like (P variant)0.000000007843Direct
Glutathione S-transferase (GST), C-terminal domain0.0000002177Direct
Glutathione S-transferase (GST), N-terminal domain0.0000004801Direct
Phoshoinositide 3-kinase (PI3K), catalytic domain0.0000004999Direct
F1F0 ATP synthase subunit C0.00004104Direct
ARID domain0.00004104Direct
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.00006284Direct
Hemocyanin middle domain0.0003457Direct
Ankyrin repeat0.001606Inherited
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.003888Inherited
Bromodomain0.004323Inherited
RING finger domain, C3HC40.006069Inherited
Phosphate binding protein-like0.009716Inherited
FAD/NAD-linked reductases, N-terminal and central domains0.0099Inherited
PDEase0.02269Inherited
Glutathione peroxidase-like0.02414Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.04075Inherited
Group II chaperonin (CCT, TRIC), apical domain0.04075Inherited
PHD domain0.04122Inherited
Ubiquitin carboxyl-terminal hydrolase UCH-L0.05139Inherited
Histone deacetylase, HDAC0.05139Inherited
EF-hand modules in multidomain proteins0.05139Inherited
Chromo domain0.08007Inherited
Erythroid transcription factor GATA-10.08066Inherited
Hect, E3 ligase catalytic domain0.08066Inherited
Proteasome subunits0.09772Inherited
cAMP-binding domain0.09772Inherited
Pleckstrin-homology domain (PH domain)0.1655Inherited
Fatty acid binding protein-like0.2892Inherited
L-arabinose binding protein-like0.6293Inherited
Insulin-like0.7298Inherited
Canonical RBD0.773Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.9604Inherited
Nucleosome core histones1Inherited
Neurotransmitter-gated ion-channel transmembrane pore1Inherited
Nicotinic receptor ligand binding domain-like1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
5' to 3' exonuclease, C-terminal subdomain0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
RBP11-like subunits of RNA polymerase0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Heme-dependent catalase-like0Direct
GST C-terminal domain-like0.000000003467Direct
PIN domain-like0.00000142Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.000002031Direct
F1F0 ATP synthase subunit C0.00002042Direct
ARID-like0.00002042Direct
Thioredoxin-like0.00002503Direct
Di-copper centre-containing domain0.0001079Direct
PLC-like phosphodiesterases0.000176Direct
NAD kinase/diacylglycerol kinase-like0.0002679Direct
Sec63 N-terminal domain-like0.0008792Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.001882Inherited
Ankyrin repeat0.001999Inherited
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.002331Inherited
Cysteine-rich domain0.003518Inherited
ACP-like0.004798Inherited
Bromodomain0.004923Inherited
RING/U-box0.005056Inherited
Periplasmic binding protein-like II0.01108Inherited
Chromo domain-like0.01716Inherited
GroEL apical domain-like0.02243Inherited
GroEL equatorial domain-like0.02243Inherited
GroEL-intermediate domain like0.02243Inherited
HD-domain/PDEase-like0.02499Inherited
HRDC-like0.05562Inherited
Arginase/deacetylase0.05562Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.05908Inherited
"Winged helix" DNA-binding domain0.08639Inherited
Hect, E3 ligase catalytic domain0.08706Inherited
Sm-like ribonucleoproteins0.08706Inherited
BRCT domain0.102Inherited
cAMP-binding domain-like0.1059Inherited
P-loop containing nucleoside triphosphate hydrolases0.1452Inherited
FYVE/PHD zinc finger0.1809Inherited
Periplasmic binding protein-like I0.2806Inherited
PLP-dependent transferases0.2877Inherited
PH domain-like0.3741Inherited
Saposin0.4241Inherited
S-adenosyl-L-methionine-dependent methyltransferases0.455Inherited
Cysteine proteinases0.4803Inherited
Lipocalins0.5787Inherited
Protein kinase-like (PK-like)0.6439Inherited
RNA-binding domain, RBD0.6977Inherited
E set domains0.7191Inherited
Insulin-like0.7446Inherited
EF-hand0.8547Inherited
Nucleotidylyl transferase0.8857Inherited
Metallo-dependent phosphatases0.8991Inherited
MFS general substrate transporter0.983Inherited
Histone-fold1Inherited
Nicotinic receptor ligand binding domain-like1Inherited
Neurotransmitter-gated ion-channel transmembrane pore1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50729,47473
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 0Direct
    47473,51695
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.000000005636Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000001402Direct
    52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0002016Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0002016Direct
    51905,55424
  • 51905 - FAD/NAD(P)-binding domain
  • 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain
  • 0.002331Inherited
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.004798Inherited
    57889,57889
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 0.01115Inherited
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.02243Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.02243Inherited
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.05562Inherited
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.102Inherited
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 1Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50729,47473,51695
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0002016Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0002016Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.02243Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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