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Worm Phenotype (WP): muscle system morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   morphology variant [WBPhenotype:0000520] <5>(443|524) (443|228|63)
+ 1:   organ system morphology variant [WBPhenotype:0000534] <9>(98|103) (99|47|16)
0:   muscle system morphology variant [WBPhenotype:0000603] <2>(21|23) (21|16|5)
- 1:   nonstriated muscle morphology variant [WBPhenotype:0000923] <3>(0|0) (0|0|0)
- 1:   striated muscle morphology variant [WBPhenotype:0000924] <2>(20|23) (20|16|5)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Integrin domains0Direct
Spectrin repeat0.0000001527Direct
SH2 domain0.0000003449Direct
Calpain large subunit, middle domain (domain III)0.0000003493Direct
SH3-domain0.0000005131Direct
PH domain-like0.000009535Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00001333Direct
Calponin-homology domain, CH-domain0.00002003Direct
Myosin rod fragments0.00003384Direct
Second domain of FERM0.00009945Direct
Immunoglobulin0.0003562Direct
Voltage-gated potassium channels0.0005687Direct
Fibronectin type III0.003323Inherited
DBL homology domain (DH-domain)0.009211Inherited
Tropomyosin0.01322Inherited
Troponin coil-coiled subunits0.01791Inherited
EGF/Laminin0.01871Inherited
Cysteine-rich domain0.01991Inherited
Growth factor receptor domain0.01991Inherited
Actin-like ATPase domain0.1313Inherited
Glutathione synthetase ATP-binding domain-like0.2864Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Integrin domains0Direct
Spectrin repeat0.0000001468Direct
SH3-domain0.000000414Direct
SH2 domain0.0000005954Direct
Calpain large subunit, middle domain (domain III)0.0000007429Direct
Calponin-homology domain, CH-domain0.00001584Direct
Pleckstrin-homology domain (PH domain)0.00001921Direct
LIM domain0.00004201Direct
EF-hand modules in multidomain proteins0.00005696Direct
Calpain large subunit, catalytic domain (domain II)0.00005711Direct
Myosin rod fragments0.00005995Direct
Third domain of FERM0.0001133Direct
Second domain of FERM0.000137Direct
First domain of FERM0.0001597Direct
I set domains0.0005295Direct
Synaptotagmin-like (S variant)0.001409Inherited
Fibronectin type III0.002721Inherited
PLC-like (P variant)0.004023Inherited
DBL homology domain (DH-domain)0.007633Inherited
Tropomyosin0.01099Inherited
Laminin-type module0.01499Inherited
Lamin A/C globular tail domain0.01499Inherited
Actin/HSP700.1176Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Integrin domains0Direct
Spectrin repeat0.000000123Direct
SH2 domain0.0000002784Direct
Calpain large subunit, middle domain (domain III)0.000000282Direct
SH3-domain0.0000004148Direct
PH domain-like0.000007775Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00001088Direct
Calponin-homology domain, CH-domain0.00001638Direct
Myosin rod fragments0.00002771Direct
Second domain of FERM0.00008169Direct
Immunoglobulin0.0002948Direct
Voltage-gated potassium channels0.0004722Direct
Fibronectin type III0.002811Inherited
DBL homology domain (DH-domain)0.007922Inherited
Tropomyosin0.01143Inherited
Troponin coil-coiled subunits0.01555Inherited
EGF/Laminin0.01626Inherited
Cysteine-rich domain0.01732Inherited
Growth factor receptor domain0.01732Inherited
Actin-like ATPase domain0.1194Inherited
Glutathione synthetase ATP-binding domain-like0.2678Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00000007419Direct
    54001,49758
  • 54001 - Cysteine proteinases
  • 49758 - Calpain large subunit, middle domain (domain III)
  • 0.00000007419Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.000006607Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.00001358Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00001767Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.0001916Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.000232Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.000554Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.002499Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.003593Inherited
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.00409Inherited
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.00409Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.00409Inherited
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.01143Inherited
    64593,74853
  • 64593 - Intermediate filament protein, coiled coil region
  • 74853 - Lamin A/C globular tail domain
  • 0.01555Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1194Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000000153Direct
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00000001113Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0001503Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.00109Inherited
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.001211Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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