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Worm Phenotype (WP): reproductive system morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   morphology variant [WBPhenotype:0000520] <5>(443|524) (443|228|63)
+ 1:   organ system morphology variant [WBPhenotype:0000534] <9>(98|103) (99|47|16)
0:   reproductive system morphology variant [WBPhenotype:0000605] <5>(49|49) (49|17|6)
- 1:   gonad morphology variant [WBPhenotype:0001355] <10>(29|29) (29|9|2)
- 1:   hermaphrodite reproductive system morphology variant [WBPhenotype:0001335] <3>(22|22) (23|7|2)
- 1:   cloacal morphology variant [WBPhenotype:0000908] <2>(0|0) (0|0|0)
- 1:   connection of gonad variant [WBPhenotype:0000665](0|0) (0|0|0)
- 1:   male reproductive system morphology variant [WBPhenotype:0001306](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Ribosomal proteins S24e, L23 and L15e0Direct
GroEL equatorial domain-like0Direct
GroEL-intermediate domain like0Direct
14-3-3 protein0Direct
Nop domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL apical domain-like0.000000001582Direct
Multidrug efflux transporter AcrB transmembrane domain0.000003262Direct
HMG-box0.00002467Direct
Retrovirus zinc finger-like domains0.00003054Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.00008874Direct
RNA-binding domain, RBD0.0001813Direct
Sm-like ribonucleoproteins0.0002015Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.0003315Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004283Direct
"Winged helix" DNA-binding domain0.0004526Direct
RBP11-like subunits of RNA polymerase0.0005194Direct
GINS helical bundle-like0.0005194Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0009302Direct
Zn-binding ribosomal proteins0.0009953Direct
Cullin homology domain0.0009953Direct
S15/NS1 RNA-binding domain0.002179Inherited
Class II aaRS ABD-related0.002286Inherited
Nucleic acid-binding proteins0.002638Inherited
Translation proteins0.003428Inherited
L30e-like0.004447Inherited
TAZ domain0.005548Inherited
Translational machinery components0.005548Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.01228Inherited
WD40 repeat-like0.01379Inherited
Class II aaRS and biotin synthetases0.01635Inherited
Translation proteins SH3-like domain0.02567Inherited
ARM repeat0.02938Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0301Inherited
Histone-fold0.03117Inherited
Activating enzymes of the ubiquitin-like proteins0.09733Inherited
Prefoldin0.09733Inherited
P-loop containing nucleoside triphosphate hydrolases0.1026Inherited
S-adenosylmethionine synthetase0.2301Inherited
Subtilisin-like0.2301Inherited
Smc hinge domain0.2301Inherited
Nucleotide-diphospho-sugar transferases0.4324Inherited
Cysteine-rich domain0.7509Inherited
Tubulin nucleotide-binding domain-like0.8318Inherited
Tubulin C-terminal domain-like0.9207Inherited
beta-beta-alpha zinc fingers0.9254Inherited
Protein kinase-like (PK-like)1Inherited
NAD(P)-binding Rossmann-fold domains1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
POU-specific domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0Direct
Integrin domains0Direct
MIF4G domain-like0Direct
Nop domain0Direct
14-3-3 protein0Direct
RNA-polymerase beta0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Proteasome subunits0.000000009361Direct
Group II chaperonin (CCT, TRIC), apical domain0.00000005023Direct
Multidrug efflux transporter AcrB transmembrane domain0.000007598Direct
Laminin-type module0.00001729Direct
Canonical RBD0.00008359Direct
HMG-box0.00009181Direct
Tandem AAA-ATPase domain0.00009624Direct
Retrovirus zinc finger-like domains0.00009962Direct
Ubiquitin activating enzymes (UBA)0.000119Direct
RecA protein-like (ATPase-domain)0.0005969Direct
Glycosyl transferases group 10.0008029Direct
Anticodon-binding domain0.0008029Direct
Anticodon-binding domain of Class II aaRS0.0008029Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.001644Inherited
L30e/L7ae ribosomal proteins0.003351Inherited
Heat shock protein 70kD (HSP70), peptide-binding domain0.004017Inherited
WD40-repeat0.005179Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.02258Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.04526Inherited
Elongation factors0.05108Inherited
Forkhead DNA-binding domain0.05605Inherited
Actin/HSP700.05849Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.06531Inherited
Nucleosome core histones0.06686Inherited
Translational machinery components0.08759Inherited
Prefoldin0.1366Inherited
Cold shock DNA-binding domain-like0.1536Inherited
Proprotein convertase P-domain0.2122Inherited
Smc hinge domain0.2122Inherited
S-adenosylmethionine synthetase0.2122Inherited
Subtilases0.2122Inherited
Chromo domain0.2122Inherited
Cyclin0.3596Inherited
Clathrin adaptor core protein0.4759Inherited
I set domains0.5103Inherited
Tubulin, GTPase domain0.8198Inherited
Tubulin, C-terminal domain0.91Inherited
Protein kinases, catalytic subunit1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nop domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
GroEL equatorial domain-like0Direct
GroEL-intermediate domain like0Direct
14-3-3 protein0Direct
GroEL apical domain-like0.000000001262Direct
Multidrug efflux transporter AcrB transmembrane domain0.000002658Direct
HMG-box0.00002018Direct
Retrovirus zinc finger-like domains0.000025Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000729Direct
RNA-binding domain, RBD0.0001493Direct
Sm-like ribonucleoproteins0.000166Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.0002743Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.000355Direct
"Winged helix" DNA-binding domain0.0003751Direct
RBP11-like subunits of RNA polymerase0.0004308Direct
GINS helical bundle-like0.0004308Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0007755Direct
Zn-binding ribosomal proteins0.0008302Direct
Cullin homology domain0.0008302Direct
S15/NS1 RNA-binding domain0.001834Inherited
Class II aaRS ABD-related0.001925Inherited
Nucleic acid-binding proteins0.002226Inherited
Translation proteins0.002903Inherited
L30e-like0.003775Inherited
TAZ domain0.004725Inherited
Translational machinery components0.004725Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.01061Inherited
WD40 repeat-like0.01194Inherited
Class II aaRS and biotin synthetases0.01418Inherited
Translation proteins SH3-like domain0.02247Inherited
ARM repeat0.0258Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.02644Inherited
Histone-fold0.0274Inherited
Prefoldin0.08792Inherited
Activating enzymes of the ubiquitin-like proteins0.08792Inherited
P-loop containing nucleoside triphosphate hydrolases0.09284Inherited
S-adenosylmethionine synthetase0.2131Inherited
Smc hinge domain0.2131Inherited
Subtilisin-like0.2131Inherited
Nucleotide-diphospho-sugar transferases0.4115Inherited
Cysteine-rich domain0.7313Inherited
Tubulin nucleotide-binding domain-like0.8141Inherited
Tubulin C-terminal domain-like0.9066Inherited
beta-beta-alpha zinc fingers0.9117Inherited
NAD(P)-binding Rossmann-fold domains1Inherited
Protein kinase-like (PK-like)1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0001362Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.000355Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.0004308Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0004308Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.0008302Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.001834Inherited
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.009589Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.01849Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.02247Inherited
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.02644Inherited
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.2131Inherited
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.2131Inherited
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.2131Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.8141Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48371,48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0001362Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.000355Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.02644Inherited
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.2131Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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