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Worm Phenotype (WP): cell cycle variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ 1:   cell physiology variant [WBPhenotype:0000536] <35>(156|154) (158|67|19)
0:   cell cycle variant [WBPhenotype:0000740] <5>(4|4) (4|2|0)
- 1:   cell cycle progression variant [WBPhenotype:0001995] <4>(0|1) (0|1|0)
- 1:   DNA damage checkpoint variant [WBPhenotype:0000741] <3>(0|0) (0|0|0)
- 1:   metaphase to anaphase transition defect [WBPhenotype:0001496] <2>(1|1) (1|1|0)
- 1:   cell cycle defective early emb [WBPhenotype:0001114] <1>(2|2) (2|0|0)
- 1:   interphase entry defective early emb [WBPhenotype:0001043](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Cyclin-like0.0001851Direct
P-loop containing nucleoside triphosphate hydrolases0.0002197Direct
Nucleic acid-binding proteins0.0006652Direct
TPR-like0.007093Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00000624Direct
Extended AAA-ATPase domain0.00001688Direct
Cyclin0.0003453Direct
Tetratricopeptide repeat (TPR)0.03526Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Cyclin-like0.0001524Direct
P-loop containing nucleoside triphosphate hydrolases0.0001811Direct
Nucleic acid-binding proteins0.000553Direct
TPR-like0.006069Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.001113Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.00253Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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