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Worm Phenotype (WP): embryonic cell physiology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ 1:   cell physiology variant [WBPhenotype:0000536] <35>(156|154) (158|67|19)
0:   embryonic cell physiology variant [WBPhenotype:0000763] <1>(13|17) (13|7|0)
- 1:   embryonic cell organization biogenesis variant [WBPhenotype:0000764] <6>(13|17) (13|7|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000000001464Direct
Tubulin C-terminal domain-like0.000000895Direct
P-loop containing nucleoside triphosphate hydrolases0.000003264Direct
Tubulin nucleotide-binding domain-like0.000005809Direct
Prefoldin0.00001083Direct
POZ domain0.00002592Direct
TPR-like0.003491Inherited
ARM repeat0.006668Inherited
Cyclin-like0.01423Inherited
DNA/RNA polymerases0.03559Inherited
WD40 repeat-like0.05146Inherited
Nucleic acid-binding proteins0.1157Inherited
"Winged helix" DNA-binding domain0.1844Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000000001814Direct
BTB/POZ domain0.00000001499Direct
Prefoldin0.00000006297Direct
Tubulin, C-terminal domain0.0000008741Direct
Armadillo repeat0.000005527Direct
Tubulin, GTPase domain0.000005527Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.000009735Direct
DEP domain0.00002699Direct
Motor proteins0.00003107Direct
Extended AAA-ATPase domain0.0005114Direct
DNA polymerase I0.0005507Direct
Cyclin0.002156Inherited
Pumilio repeat0.002607Inherited
DnaQ-like 3'-5' exonuclease0.002607Inherited
G proteins0.006886Inherited
PDZ domain0.01349Inherited
WD40-repeat0.03051Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000000001155Direct
Tubulin C-terminal domain-like0.0000007255Direct
P-loop containing nucleoside triphosphate hydrolases0.000002659Direct
Tubulin nucleotide-binding domain-like0.000004738Direct
Prefoldin0.000008836Direct
POZ domain0.00002121Direct
TPR-like0.002956Inherited
ARM repeat0.005698Inherited
Cyclin-like0.01232Inherited
DNA/RNA polymerases0.03137Inherited
WD40 repeat-like0.04572Inherited
Nucleic acid-binding proteins0.1049Inherited
"Winged helix" DNA-binding domain0.1695Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.0000000000008485Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.000004738Direct
    53098,56672
  • 53098 - Ribonuclease H-like
  • 56672 - DNA/RNA polymerases
  • 0.00003929Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.001028Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.03832Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.1599Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.1888Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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