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Worm Phenotype (WP): chromosome segregation variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <35>(156|154) (158|67|19)
+ 1:   cell homeostasis metabolism variant [WBPhenotype:0000585] <12>(72|65) (73|28|12)
0:   chromosome segregation variant [WBPhenotype:0000773] <6>(10|9) (10|2|0)
- 1:   meiotic chromosome segregation variant [WBPhenotype:0001499] <2>(6|4) (6|1|0)
- 1:   mitotic chromosome segregation variant [WBPhenotype:0001378] <2>(2|3) (2|0|0)
- 1:   aneuploidy [WBPhenotype:0001882] <1>(6|4) (6|1|0)
- 1:   chromosome alignment variant [WBPhenotype:0001584](0|0) (0|0|0)
- 1:   chromosome segregation variant karyomeres early emb [WBPhenotype:0001077](1|1) (1|1|0)
- 1:   sister chromatid segregation defective early emb [WBPhenotype:0000772](2|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
LEM domain0Direct
The spindle assembly checkpoint protein mad20Direct
Histone-fold0Direct
Smc hinge domain0.000000002573Direct
Skp1 dimerisation domain-like0.000894Direct
Cyclin-like0.009005Inherited
P-loop containing nucleoside triphosphate hydrolases0.01493Inherited
POZ domain0.0568Inherited
Nucleic acid-binding proteins0.06217Inherited
"Winged helix" DNA-binding domain0.397Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0Direct
LEM domain0Direct
Smc hinge domain0Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00000000489Direct
Motor proteins0.000007927Direct
BTB/POZ domain0.000907Direct
Skp1 dimerisation domain-like0.001109Inherited
Cyclin0.003415Inherited
ABC transporter ATPase domain-like0.01768Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold0Direct
The spindle assembly checkpoint protein mad20Direct
LEM domain0Direct
Smc hinge domain0.000000002054Direct
Skp1 dimerisation domain-like0.0007453Direct
Cyclin-like0.007739Inherited
P-loop containing nucleoside triphosphate hydrolases0.01293Inherited
POZ domain0.05055Inherited
Nucleic acid-binding proteins0.05545Inherited
"Winged helix" DNA-binding domain0.3764Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.0004562Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.05413Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)