SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): developmental morphology variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   morphology variant [WBPhenotype:0000520] <5>(443|524) (443|228|63)
+ 1:   organism morphology variant [WBPhenotype:0000535] <7>(320|424) (320|183|49)
0:   developmental morphology variant [WBPhenotype:0000934] <4>(6|5) (6|3|0)
- 1:   dauer body morphology variant [WBPhenotype:0001545] <8>(0|0) (0|0|0)
- 1:   egg morphology variant [WBPhenotype:0000037] <4>(2|3) (3|2|0)
- 1:   larval body morphology variant [WBPhenotype:0000035] <1>(1|1) (1|0|0)
- 1:   adult body morphology variant [WBPhenotype:0000036](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
LuxS/MPP-like metallohydrolase0.0000000000342Direct
ARM repeat0.00006553Direct
RNA-binding domain, RBD0.0001279Direct
EGF/Laminin0.0003295Direct
Growth factor receptor domain0.0005062Direct
Protein kinase-like (PK-like)0.06097Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
MPP-like0.0000000001072Direct
Armadillo repeat0.0000006179Direct
Pumilio repeat0.00001243Direct
Canonical RBD0.0001028Direct
Protein kinases, catalytic subunit0.0716Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
LuxS/MPP-like metallohydrolase0.00000000002714Direct
ARM repeat0.00005371Direct
RNA-binding domain, RBD0.0001052Direct
EGF/Laminin0.0002726Direct
Growth factor receptor domain0.00042Direct
Protein kinase-like (PK-like)0.05435Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.00000000002714Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00003826Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.00004729Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)