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Worm Phenotype (WP): microtubule organization biogenesis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + + + 5:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
+ + + + 4:   cell component morphology variant [WBPhenotype:0002089] <17>(84|85) (84|42|9)
+ + + 3:   cell organization biogenesis variant [WBPhenotype:0010002] <5>(40|43) (41|18|4)
+ + 2:   organelle organization biogenesis variant [WBPhenotype:0001344] <10>(30|29) (31|10|1)
+ + 2:   Variant [WBPhenotype:0000886] <2>
+ 1:   cytoskeleton organization biogenesis variant [WBPhenotype:0001345] <2>(14|14) (14|5|0)
+ 1:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
0:   microtubule organization biogenesis variant [WBPhenotype:0001588] <4>(9|11) (9|5|0)
- 1:   spindle variant [WBPhenotype:0002414] <8>(7|11) (7|4|0)
- 1:   microtubule depolymerization variant [WBPhenotype:0001590](0|0) (0|0|0)
- 1:   microtubule nucleation variant [WBPhenotype:0001589](0|0) (0|0|0)
- 1:   microtubule polymerization variant [WBPhenotype:0001591](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
P-loop containing nucleoside triphosphate hydrolases0.0000000000004606Direct
Tubulin nucleotide-binding domain-like0.000000003124Direct
Tubulin C-terminal domain-like0.000000005756Direct
POZ domain0.0000002561Direct
ARM repeat0.000003641Direct
TPR-like0.00002101Direct
Prefoldin0.00005746Direct
"Winged helix" DNA-binding domain0.0002666Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
BTB/POZ domain0.0000000000003564Direct
Motor proteins0.0000000000431Direct
Tubulin, GTPase domain0.000000009699Direct
Tubulin, C-terminal domain0.0000000178Direct
Armadillo repeat0.00000002319Direct
DEP domain0.000007113Direct
G proteins0.00001268Direct
Extended AAA-ATPase domain0.00003465Direct
Prefoldin0.00004567Direct
PDZ domain0.0004834Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
P-loop containing nucleoside triphosphate hydrolases0.0000000000003624Direct
Tubulin nucleotide-binding domain-like0.000000002486Direct
Tubulin C-terminal domain-like0.000000004586Direct
POZ domain0.0000002058Direct
ARM repeat0.000002957Direct
TPR-like0.00001712Direct
Prefoldin0.000047Direct
"Winged helix" DNA-binding domain0.0002195Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.000000002486Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.0003666Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0009455Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00979Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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