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Worm Phenotype (WP): cadmium response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + 2:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(115|103) (118|51|16)
+ 1:   metal response variant [WBPhenotype:0000591] <15>(12|13) (13|10|5)
0:   cadmium response variant [WBPhenotype:0001653] <2>(9|10) (10|9|5)
- 1:   cadmium hypersensitive [WBPhenotype:0001655](7|7) (8|7|3)
- 1:   cadmium resistant [WBPhenotype:0001654](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ABC transporter transmembrane region0.00000000000004119Direct
Cation efflux protein cytoplasmic domain-like0.0000008967Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.000007024Direct
Cytochrome P4500.000009366Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.00001147Direct
HSP20-like chaperones0.00001844Direct
GST C-terminal domain-like0.06928Inherited
Cation efflux protein transmembrane domain-like0.253Inherited
Thioredoxin-like0.417Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
ABC transporter transmembrane region0.00000000000005061Direct
ABC transporter ATPase domain-like0.0000000004255Direct
Cation efflux protein transmembrane domain-like0.00000006931Direct
Cation efflux protein cytoplasmic domain-like0.0000004547Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0000059Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.00001695Direct
Cytochrome P4500.00002475Direct
Actin/HSP700.0006604Direct
Glutathione S-transferase (GST), C-terminal domain0.09509Inherited
Glutathione S-transferase (GST), N-terminal domain0.09509Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ABC transporter transmembrane region0.00000000000003257Direct
Cation efflux protein cytoplasmic domain-like0.0000007294Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.000005746Direct
Cytochrome P4500.000007666Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.000009387Direct
HSP20-like chaperones0.00001513Direct
Actin-like ATPase domain0.001916Inherited
GST C-terminal domain-like0.06194Inherited
Cation efflux protein transmembrane domain-like0.2353Inherited
Thioredoxin-like0.3958Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90123,52540
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000000000003257Direct
    52540,90123
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.00000007074Direct
    161111,160240
  • 161111 - Cation efflux protein transmembrane domain-like
  • 160240 - Cation efflux protein cytoplasmic domain-like
  • 0.0000007294Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.000003258Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.000005746Direct
    56436,49854
  • 56436 - C-type lectin-like
  • 49854 - Spermadhesin, CUB domain
  • 0.0006789Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.001121Inherited
    56436,56436
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 0.001266Inherited
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.06194Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,90123,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00000007074Direct
    90123,52540,90123
  • 90123 - ABC transporter transmembrane region
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90123 - ABC transporter transmembrane region
  • 0.00000007074Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.000003258Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.000005746Direct
    56436,56436,49854
  • 56436 - C-type lectin-like
  • 56436 - C-type lectin-like
  • 49854 - Spermadhesin, CUB domain
  • 0.000266Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)