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Worm Phenotype (WP): RNA metabolism variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + 3:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + 2:   organism metabolism processing variant [WBPhenotype:0000027] <25>(178|190) (182|87|26)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <36>(149|149) (150|64|19)
+ 1:   cell homeostasis metabolism variant [WBPhenotype:0000585] <12>(60|54) (60|23|12)
+ 1:   metabolic pathway variant [WBPhenotype:0000463] <8>(39|32) (39|15|9)
0:   RNA metabolism variant [WBPhenotype:0001827] <5>(4|2) (4|0|0)
- 1:   RNA processing variant [WBPhenotype:0000028] <8>(4|2) (4|0|0)
- 1:   RNA methylation variant [WBPhenotype:0002466](0|0) (0|0|0)
- 1:   mRNA deadenylation variant [WBPhenotype:0002151](0|0) (0|0|0)
- 1:   mRNA poly-A tail length decreased [WBPhenotype:0002376](0|0) (0|0|0)
- 1:   mRNA poly-A tail length increased [WBPhenotype:0002377](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
RNA-binding domain, RBD0.000000000000001794Direct
Zn-binding ribosomal proteins0.000407Direct
L30e-like0.001722Inherited
Nucleic acid-binding proteins0.04542Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Canonical RBD6.263e-16Direct
Cold shock DNA-binding domain-like0.0009162Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RNA-binding domain, RBD0.000000000000001406Direct
Zn-binding ribosomal proteins0.000336Direct
L30e-like0.00144Inherited
Nucleic acid-binding proteins0.04015Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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