SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): backward point velocity variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + + + + 5:   behavior variant [WBPhenotype:0000517] <3>(136|138) (138|59|22)
+ + + + 4:   organism behavior variant [WBPhenotype:0000525] <22>(136|138) (138|59|22)
+ + + 3:   movement variant [WBPhenotype:0001206] <10>(64|64) (65|25|9)
+ + + 3:   locomotion variant [WBPhenotype:0000643] <10>(73|80) (74|32|15)
+ + 2:   activity level variant [WBPhenotype:0000641] <6>(22|26) (23|11|5)
+ 1:   velocity of movement variant [WBPhenotype:0004025] <6>(10|13) (11|5|1)
0:   backward point velocity variant [WBPhenotype:0002323] <2>(7|8) (8|4|1)
- 1:   backward point velocity decreased [WBPhenotype:0002324](0|0) (0|0|0)
- 1:   backward point velocity increased [WBPhenotype:0002325](1|2) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
SNF-like0.00000000000006187Direct
Insulin-like0.00000000002144Direct
SMAD MH1 domain0.000004275Direct
Voltage-gated potassium channels0.00001062Direct
SMAD/FHA domain0.0001189Direct
cAMP-binding domain-like0.0002273Direct
Transducin (alpha subunit), insertion domain0.456Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
SNF-like0.0000000000002407Direct
Insulin-like0.0000000002095Direct
SMAD MH1 domain0.000008996Direct
SMAD domain0.00003923Direct
Pyridoxal-dependent decarboxylase0.00006837Direct
Voltage-gated potassium channels0.0001978Direct
cAMP-binding domain0.0003435Direct
Transducin (alpha subunit), insertion domain0.4271Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SNF-like0.00000000000004877Direct
Insulin-like0.00000000001701Direct
SMAD MH1 domain0.000003484Direct
Voltage-gated potassium channels0.000008664Direct
SMAD/FHA domain0.00009778Direct
cAMP-binding domain-like0.0001875Direct
PLP-dependent transferases0.01163Inherited
Transducin (alpha subunit), insertion domain0.435Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.00002679Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001103Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.000415Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.435Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001481Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)