SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): cytokinesis variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <35>(156|154) (158|67|19)
+ 1:   cell division variant [WBPhenotype:0000746] <20>(51|53) (51|20|4)
0:   cytokinesis variant [WBPhenotype:0002408] <5>(11|12) (11|2|0)
- 1:   cleavage furrow defective [WBPhenotype:0002410] <5>(4|5) (4|0|0)
- 1:   cytokinesis failure [WBPhenotype:0002391] <1>(0|1) (0|0|0)
- 1:   cytokinesis variant emb [WBPhenotype:0001018] <1>(11|12) (11|2|0)
- 1:   actomyosin contractility defective [WBPhenotype:0002004](0|0) (0|0|0)
- 1:   cortical blebs present [WBPhenotype:0002007](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Profilin (actin-binding protein)0Direct
Histone-fold0Direct
P-loop containing nucleoside triphosphate hydrolases0.0009058Direct
GTPase activation domain, GAP0.002831Inherited
Calponin-homology domain, CH-domain0.003855Inherited
Actin-like ATPase domain0.007676Inherited
Tubulin nucleotide-binding domain-like0.01193Inherited
Tubulin C-terminal domain-like0.01193Inherited
BAR/IMD domain-like0.07785Inherited
ARM repeat0.1227Inherited
Nucleic acid-binding proteins0.209Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0Direct
Profilin (actin-binding protein)0Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.000000002141Direct
Pumilio repeat0.002673Inherited
Calponin-homology domain, CH-domain0.00377Inherited
G proteins0.00731Inherited
Actin/HSP700.007973Inherited
BCR-homology GTPase activation domain (BH-domain)0.009436Inherited
Tubulin, GTPase domain0.01154Inherited
Tubulin, C-terminal domain0.01154Inherited
Motor proteins0.08397Inherited
Extended AAA-ATPase domain0.09453Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold0Direct
Profilin (actin-binding protein)0Direct
P-loop containing nucleoside triphosphate hydrolases0.0007552Direct
GTPase activation domain, GAP0.002391Inherited
Calponin-homology domain, CH-domain0.003268Inherited
Actin-like ATPase domain0.006575Inherited
Tubulin C-terminal domain-like0.0103Inherited
Tubulin nucleotide-binding domain-like0.0103Inherited
BAR/IMD domain-like0.06985Inherited
ARM repeat0.1114Inherited
Nucleic acid-binding proteins0.1929Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.006575Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0103Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)