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Worm Phenotype (WP): hypoxia response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <11>(366|425) (369|192|56)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(358|416) (360|189|55)
+ + 2:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(128|115) (130|52|16)
+ 1:   oxygen response variant [WBPhenotype:0000464] <4>(10|6) (10|3|0)
0:   hypoxia response variant [WBPhenotype:0002423] <3>(9|5) (9|3|0)
- 1:   hypoxia hypersensitive [WBPhenotype:0001989](1|0) (1|0|0)
- 1:   hypoxia resistant [WBPhenotype:0001990](6|5) (6|3|0)
- 1:   hypoxia response attenuated [WBPhenotype:0001991](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Class II aaRS and biotin synthetases0Direct
Nucleotidylyl transferase0Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000000000001489Direct
Class II aaRS ABD-related0.000000001126Direct
ValRS/IleRS/LeuRS editing domain0.000000002759Direct
PYP-like sensor domain (PAS domain)0.00001095Direct
Quinoprotein alcohol dehydrogenase-like0.0004673Direct
HLH, helix-loop-helix DNA-binding domain0.0007021Direct
Nucleic acid-binding proteins0.02715Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0Direct
Anticodon-binding domain of Class II aaRS0Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000000000001046Direct
ValRS/IleRS/LeuRS editing domain0.00000000438Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Class II aaRS and biotin synthetases0Direct
Nucleotidylyl transferase0Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000000000001178Direct
Class II aaRS ABD-related0.0000000008977Direct
ValRS/IleRS/LeuRS editing domain0.000000002202Direct
PYP-like sensor domain (PAS domain)0.000008931Direct
Quinoprotein alcohol dehydrogenase-like0.0003876Direct
HLH, helix-loop-helix DNA-binding domain0.000584Direct
Nucleic acid-binding proteins0.0238Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0Direct
    50677,52374
  • 50677 - ValRS/IleRS/LeuRS editing domain
  • 52374 - Nucleotidylyl transferase
  • 0.000000002202Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.00000004421Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)