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Worm Phenotype (WP): positive chemotaxis defective

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + + 9:   Variant [WBPhenotype:0000886] <4>
+ + + + + + + + 8:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + + + + 7:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + + + + 6:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + + + + 5:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(115|103) (118|51|16)
+ + + + + 5:   behavior variant [WBPhenotype:0000517] <2>(133|132) (134|53|20)
+ + + + 4:   chemical response variant [WBPhenotype:0000523] <11>(65|58) (66|25|6)
+ + + + 4:   chemosensory behavior variant [WBPhenotype:0001049] <3>(20|20) (20|5|0)
+ + + + 4:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (134|53|20)
+ + + 3:   movement variant [WBPhenotype:0001206] <9>(65|65) (65|25|9)
+ + + 3:   chemosensory response variant [WBPhenotype:0001040] <3>(20|20) (20|5|0)
+ + + 3:   locomotion variant [WBPhenotype:0000643] <9>(74|80) (74|32|15)
+ + 2:   chemotaxis variant [WBPhenotype:0001434] <2>(20|19) (20|5|0)
+ 1:   positive chemotaxis variant [WBPhenotype:0000635] <3>(13|13) (13|4|0)
0:   positive chemotaxis defective [WBPhenotype:0000015] <4>(8|6) (8|3|0)
- 1:   aqueous positive chemotaxis defective [WBPhenotype:0001441] <10>(5|5) (5|2|0)
- 1:   odorant positive chemotaxis defective [WBPhenotype:0001438] <10>(4|3) (4|1|0)
- 1:   acetate chemotaxis defective [WBPhenotype:0001736](0|0) (0|0|0)
- 1:   ammonium chemotaxis defective [WBPhenotype:0001738](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
cAMP-binding domain-like0.00000001986Direct
Periplasmic binding protein-like II0.000001645Direct
TPR-like0.00002475Direct
Multidrug efflux transporter AcrB transmembrane domain0.00008529Direct
Voltage-gated potassium channels0.0002029Direct
HLH, helix-loop-helix DNA-binding domain0.002273Inherited
Periplasmic binding protein-like I0.2683Inherited
Nucleotide cyclase0.6598Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
cAMP-binding domain0.00000003356Direct
Phosphate binding protein-like0.000001689Direct
Multidrug efflux transporter AcrB transmembrane domain0.0001177Direct
HLH, helix-loop-helix DNA-binding domain0.004079Inherited
L-arabinose binding protein-like0.4703Inherited
Adenylyl and guanylyl cyclase catalytic domain0.6118Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
cAMP-binding domain-like0.00000001597Direct
Periplasmic binding protein-like II0.000001342Direct
TPR-like0.00002031Direct
Multidrug efflux transporter AcrB transmembrane domain0.00007037Direct
Voltage-gated potassium channels0.0001678Direct
HLH, helix-loop-helix DNA-binding domain0.001921Inherited
Periplasmic binding protein-like I0.25Inherited
Nucleotide cyclase0.6387Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.00002731Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.000287Direct
    56112,55073
  • 56112 - Protein kinase-like (PK-like)
  • 55073 - Nucleotide cyclase
  • 0.2751Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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