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Worm Phenotype (WP): RNA processing variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + + 4:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   organism metabolism processing variant [WBPhenotype:0000027] <25>(178|190) (182|87|26)
+ + + 3:   cell physiology variant [WBPhenotype:0000536] <36>(149|149) (150|64|19)
+ + 2:   cell homeostasis metabolism variant [WBPhenotype:0000585] <12>(60|54) (60|23|12)
+ + 2:   metabolic pathway variant [WBPhenotype:0000463] <8>(39|32) (39|15|9)
+ + 2:   gene expression variant [WBPhenotype:0000717] <11>(127|139) (131|64|20)
+ 1:   RNA expression variant [WBPhenotype:0000113] <10>(20|16) (20|5|0)
+ 1:   RNA metabolism variant [WBPhenotype:0001827] <5>(4|2) (4|0|0)
0:   RNA processing variant [WBPhenotype:0000028] <8>(4|2) (4|0|0)
- 1:   alternative splicing variant [WBPhenotype:0001807] <1>(1|0) (1|0|0)
- 1:   3 prime target RNA uridylation reduced [WBPhenotype:0002254](0|0) (0|0|0)
- 1:   RNA degradation variant [WBPhenotype:0001826](0|0) (0|0|0)
- 1:   dsRNA processing defective [WBPhenotype:0002153](0|0) (0|0|0)
- 1:   mRNA splicing variant [WBPhenotype:0001834](0|0) (0|0|0)
- 1:   mRNA surveillance defective [WBPhenotype:0001538](3|1) (3|0|0)
- 1:   mRNA turnover variant [WBPhenotype:0001537](0|0) (0|0|0)
- 1:   pre miRNA processing defective [WBPhenotype:0002155](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Zn-binding ribosomal proteins0.000003032Direct
RNA-binding domain, RBD0.00000423Direct
L30e-like0.00001039Direct
Nucleic acid-binding proteins0.003403Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Canonical RBD0.0000004718Direct
Cold shock DNA-binding domain-like0.003024Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Zn-binding ribosomal proteins0.00000246Direct
RNA-binding domain, RBD0.000003436Direct
L30e-like0.000008448Direct
Nucleic acid-binding proteins0.002878Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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