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Worm Phenotype (WP): life span variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ 1:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
0:   life span variant [WBPhenotype:0000039] <6>(26|32) (27|14|3)
- 1:   dauer lifespan variant [WBPhenotype:0001540] <2>(2|3) (2|1|0)
- 1:   extended life span [WBPhenotype:0000061] <1>(4|11) (5|3|0)
- 1:   diet induced life span variant [WBPhenotype:0001837](0|0) (0|0|0)
- 1:   drug induced life span variant [WBPhenotype:0001871](0|0) (0|0|0)
- 1:   shortened life span [WBPhenotype:0001171](5|7) (5|2|0)
- 1:   temperature influenced life span variant [WBPhenotype:0001789](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Aminoacid dehydrogenase-like, N-terminal domain0Direct
Ribosomal protein L10Direct
Carbonic anhydrase0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Heme-dependent catalase-like0Direct
SET domain0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
14-3-3 protein0Direct
Histone-fold0.00000000004996Direct
Clavaminate synthase-like0.0000001283Direct
FAD-linked reductases, C-terminal domain0.0000004769Direct
Sm-like ribonucleoproteins0.000003471Direct
"Winged helix" DNA-binding domain0.000003597Direct
Cullin homology domain0.00001427Direct
FAD/NAD(P)-binding domain0.00009411Direct
4Fe-4S ferredoxins0.0002342Direct
GroEL equatorial domain-like0.0003346Direct
Cullin repeat-like0.0003346Direct
GroEL-intermediate domain like0.0003346Direct
Protein kinase-like (PK-like)0.0003521Direct
Ferritin-like0.0004337Direct
GroEL apical domain-like0.0009016Direct
Nucleotide-binding domain0.001135Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.003301Inherited
Seven-hairpin glycosidases0.02678Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
L-aminoacid/polyamine oxidase0Direct
Ribosomal protein L10Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Aminoacid dehydrogenase-like, C-terminal domain0Direct
Carbonic anhydrase0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Cullin repeat0Direct
SCF ubiquitin ligase complex WHB domain0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Sir2 family of transcriptional regulators0Direct
Heme-dependent catalases0Direct
14-3-3 protein0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
Histone lysine methyltransferases0.000000000004059Direct
Nucleosome core histones0.00000000001476Direct
Proteasome subunits0.000006765Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000009438Direct
Cullin homology domain0.00002369Direct
Erythroid transcription factor GATA-10.00003372Direct
2Fe-2S ferredoxin domains from multidomain proteins0.0005821Direct
D-aminoacid oxidase-like0.0005821Direct
Extended AAA-ATPase domain0.0009413Direct
Fatty acid binding protein-like0.0009507Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.002071Inherited
SWIRM domain0.002826Inherited
Group II chaperonin (CCT, TRIC), apical domain0.004996Inherited
L30e/L7ae ribosomal proteins0.01109Inherited
Class I alpha-1;2-mannosidase, catalytic domain0.0347Inherited
Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain0.0502Inherited
MSP-like1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SET domain0Direct
14-3-3 protein0Direct
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain0Direct
Ribosomal protein L10Direct
Aminoacid dehydrogenase-like, N-terminal domain0Direct
Heme-dependent catalase-like0Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0Direct
Lipovitellin-phosvitin complex, superhelical domain0Direct
Carbonic anhydrase0Direct
Histone-fold0.0000000000398Direct
Clavaminate synthase-like0.0000001036Direct
FAD-linked reductases, C-terminal domain0.0000003867Direct
Sm-like ribonucleoproteins0.000002838Direct
"Winged helix" DNA-binding domain0.000002941Direct
Cullin homology domain0.00001169Direct
FAD/NAD(P)-binding domain0.00007764Direct
4Fe-4S ferredoxins0.0001938Direct
GroEL-intermediate domain like0.0002775Direct
GroEL equatorial domain-like0.0002775Direct
Cullin repeat-like0.0002775Direct
Protein kinase-like (PK-like)0.000292Direct
Ferritin-like0.0003602Direct
GroEL apical domain-like0.0007549Direct
Nucleotide-binding domain0.0009514Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.002798Inherited
Seven-hairpin glycosidases0.02344Inherited
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0.05932Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    144232,82199
  • 144232 - HIT/MYND zinc finger-like
  • 82199 - SET domain
  • 0Direct
    51905,56425
  • 51905 - FAD/NAD(P)-binding domain
  • 56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
  • 0Direct
    57903,82199
  • 57903 - FYVE/PHD zinc finger
  • 82199 - SET domain
  • 0Direct
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0Direct
    57903,51197
  • 57903 - FYVE/PHD zinc finger
  • 51197 - Clavaminate synthase-like
  • 0Direct
    51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    51905,54373
  • 51905 - FAD/NAD(P)-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0.0001839Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0002775Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0002775Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.02261Inherited
    51735,55347
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
  • 0.05932Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0Direct
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0002775Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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