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Worm Phenotype (WP): early larval arrest

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   Variant [WBPhenotype:0000886] <4>
+ + + + + + + 7:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + + + 6:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + + + 5:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + + + 4:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + + 4:   growth variant [WBPhenotype:0000030] <5>(199|260) (202|113|38)
+ + + + 4:   organism development variant [WBPhenotype:0000531] <10>(504|576) (504|246|68)
+ + + 3:   postembryonic development variant [WBPhenotype:0000049] <4>(224|299) (225|126|31)
+ + + 3:   developmental growth variant [WBPhenotype:0001015] <3>(134|181) (134|78|25)
+ + 2:   larval growth variant [WBPhenotype:0001016] <2>(134|181) (134|78|25)
+ + 2:   larval development variant [WBPhenotype:0000750] <8>(152|207) (153|89|25)
+ 1:   larval arrest [WBPhenotype:0000059] <3>(134|181) (134|78|25)
0:   early larval arrest [WBPhenotype:0000055] <2>(10|8) (10|4|2)
- 1:   L1 arrest [WBPhenotype:0000081] <2>(2|2) (2|1|0)
- 1:   L2 arrest [WBPhenotype:0000082](1|0) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
Ribosomal protein S5 domain 2-like0.0000001586Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.0000007498Direct
Ribonuclease PH domain 2-like0.0000008528Direct
POZ domain0.000001251Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003681Direct
WD40 repeat-like0.0004606Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0005843Direct
Translation proteins SH3-like domain0.0005843Direct
Quinoprotein alcohol dehydrogenase-like0.003865Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
RNA-polymerase beta-prime0Direct
Skp1 dimerisation domain-like0Direct
BTB/POZ domain0.0000000000006705Direct
Ribonuclease PH domain 2-like0.000001647Direct
Ribonuclease PH domain 1-like0.000001647Direct
Translational machinery components0.0003436Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003436Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0009302Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
Ribosomal protein S5 domain 2-like0.0000001281Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.0000006097Direct
Ribonuclease PH domain 2-like0.0000006936Direct
POZ domain0.00000102Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003054Direct
WD40 repeat-like0.0003828Direct
Translation proteins SH3-like domain0.0004867Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0004867Direct
Quinoprotein alcohol dehydrogenase-like0.003284Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    54211,55666
  • 54211 - Ribosomal protein S5 domain 2-like
  • 55666 - Ribonuclease PH domain 2-like
  • 0.0000006936Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0001777Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003054Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0001777Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003054Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)