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Worm Phenotype (WP): organism stress response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <4>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + 3:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + 2:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ 1:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(115|103) (118|51|16)
0:   organism stress response variant [WBPhenotype:0000067] <17>(30|26) (30|8|2)
- 1:   organism temperature response variant [WBPhenotype:0000146] <8>(1|0) (1|0|0)
- 1:   organism starvation response variant [WBPhenotype:0000147] <5>(1|1) (1|0|0)
- 1:   organism osmotic stress response variant [WBPhenotype:0000876] <4>(6|3) (6|0|0)
- 1:   organism heat response variant [WBPhenotype:0001273] <3>(4|5) (4|1|0)
- 1:   organism ionizing radiation response variant [WBPhenotype:0000686] <3>(2|0) (2|1|0)
- 1:   organism oxidative stress response variant [WBPhenotype:0001620] <3>(7|8) (7|2|0)
- 1:   organism UV response variant [WBPhenotype:0000143] <2>(6|6) (6|4|2)
- 1:   methyl methanesulfonate response variant [WBPhenotype:0000498] <1>(0|0) (0|0|0)
- 1:   organism crowding response variant [WBPhenotype:0000191] <1>(0|0) (0|0|0)
- 1:   organism desiccation response variant [WBPhenotype:0001417] <1>(0|0) (0|0|0)
- 1:   rhythmic tolerance to stress variant [WBPhenotype:0001709] <1>(0|0) (0|0|0)
- 1:   stress induced lethality variant [WBPhenotype:0000139] <1>(2|2) (2|0|0)
- 1:   ethyl methanesulfonate response variant [WBPhenotype:0000499](0|0) (0|0|0)
- 1:   organism electrophilic stress hypersensitive [WBPhenotype:0001634](2|2) (2|1|0)
- 1:   organism hypersensitive interstrand cross link agents [WBPhenotype:0001796](0|0) (0|0|0)
- 1:   organism response to pH variant [WBPhenotype:0001732](0|0) (0|0|0)
- 1:   stress induced arrest variant [WBPhenotype:0000140](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Heme-dependent catalase-like0Direct
GST C-terminal domain-like0.000000000003937Direct
Thioredoxin-like0.00000004084Direct
F1F0 ATP synthase subunit C0.000005336Direct
ARID-like0.000005336Direct
5' to 3' exonuclease, C-terminal subdomain0.00007221Direct
PIN domain-like0.0002239Direct
Sec63 N-terminal domain-like0.0003222Direct
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.0008678Direct
Bromodomain0.001259Inherited
Ankyrin repeat0.002056Inherited
Chromo domain-like0.004605Inherited
Clavaminate synthase-like0.01565Inherited
ARM repeat0.0263Inherited
Arginase/deacetylase0.02685Inherited
"Winged helix" DNA-binding domain0.03014Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.04066Inherited
FYVE/PHD zinc finger0.07258Inherited
Periplasmic binding protein-like II0.08606Inherited
Sm-like ribonucleoproteins0.08617Inherited
BRCT domain0.1275Inherited
P-loop containing nucleoside triphosphate hydrolases0.142Inherited
Cysteine proteinases0.1685Inherited
Lipocalins0.3838Inherited
Protein kinase-like (PK-like)0.4322Inherited
E set domains0.4526Inherited
UDP-Glycosyltransferase/glycogen phosphorylase0.513Inherited
Nucleotidylyl transferase0.6691Inherited
MFS general substrate transporter0.8975Inherited
Histone-fold1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Heme-dependent catalases0Direct
Tandem AAA-ATPase domain0.000000000371Direct
Glutathione S-transferase (GST), C-terminal domain0.000000001203Direct
Glutathione S-transferase (GST), N-terminal domain0.000000003349Direct
ARID domain0.00000937Direct
F1F0 ATP synthase subunit C0.00000937Direct
5' to 3' exonuclease, C-terminal subdomain0.0001074Direct
5' to 3' exonuclease catalytic domain0.0001074Direct
Bromodomain0.0009374Direct
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.001287Inherited
Ankyrin repeat0.001496Inherited
Glutathione peroxidase-like0.005066Inherited
PHD domain0.007139Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.0125Inherited
Group II chaperonin (CCT, TRIC), apical domain0.0125Inherited
Histone deacetylase, HDAC0.02194Inherited
FAD/NAD-linked reductases, N-terminal and central domains0.03081Inherited
Erythroid transcription factor GATA-10.03081Inherited
Chromo domain0.03207Inherited
Proteasome subunits0.0336Inherited
Phosphate binding protein-like0.07302Inherited
Fatty acid binding protein-like0.1516Inherited
PLC-like (P variant)0.4558Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.7896Inherited
Nucleosome core histones1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Heme-dependent catalase-like0Direct
GST C-terminal domain-like0.000000000003128Direct
Thioredoxin-like0.00000003291Direct
F1F0 ATP synthase subunit C0.000004366Direct
ARID-like0.000004366Direct
5' to 3' exonuclease, C-terminal subdomain0.00005949Direct
PIN domain-like0.0001852Direct
Sec63 N-terminal domain-like0.0002672Direct
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.0007265Direct
Bromodomain0.001056Inherited
Ankyrin repeat0.001734Inherited
Chromo domain-like0.003918Inherited
Clavaminate synthase-like0.01355Inherited
ARM repeat0.02301Inherited
Arginase/deacetylase0.0235Inherited
"Winged helix" DNA-binding domain0.02646Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.03594Inherited
FYVE/PHD zinc finger0.06497Inherited
Periplasmic binding protein-like II0.07741Inherited
Sm-like ribonucleoproteins0.07751Inherited
BRCT domain0.1159Inherited
P-loop containing nucleoside triphosphate hydrolases0.1297Inherited
Cysteine proteinases0.1546Inherited
Lipocalins0.3633Inherited
Protein kinase-like (PK-like)0.4108Inherited
E set domains0.4311Inherited
UDP-Glycosyltransferase/glycogen phosphorylase0.491Inherited
Nucleotidylyl transferase0.648Inherited
MFS general substrate transporter0.8819Inherited
Histone-fold1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.000000000008939Direct
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000007534Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00005949Direct
    52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0.00005949Direct
    51905,55424
  • 51905 - FAD/NAD(P)-binding domain
  • 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain
  • 0.0007265Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.001542Inherited
    57903,57903
  • 57903 - FYVE/PHD zinc finger
  • 57903 - FYVE/PHD zinc finger
  • 0.0235Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00005949Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00005949Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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