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Worm Phenotype (WP): oxidative stress response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <4>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + 3:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
+ + + 3:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ + 2:   cell homeostasis metabolism variant [WBPhenotype:0000585] <12>(65|61) (65|26|11)
+ 1:   cell stress response variant [WBPhenotype:0000142] <12>(28|24) (28|9|3)
0:   oxidative stress response variant [WBPhenotype:0000068] <3>(7|7) (7|2|0)
- 1:   paraquat response variant [WBPhenotype:0000460] <2>(7|7) (7|2|0)
- 1:   manganese induced oxidative stress response [WBPhenotype:0002231](0|0) (0|0|0)
- 1:   reduced protein oxidation levels [WBPhenotype:0002249](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.000003564Direct
Thioredoxin-like0.00002673Direct
Lipocalins0.002153Inherited
Nucleotidylyl transferase0.002153Inherited
E set domains0.02582Inherited
"Winged helix" DNA-binding domain0.04043Inherited
Cysteine proteinases0.08082Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.000005295Direct
FAD/NAD-linked reductases, N-terminal and central domains0.00001208Direct
Glutathione S-transferase (GST), N-terminal domain0.0001369Direct
Fatty acid binding protein-like0.0001472Direct
Glutathione peroxidase-like0.0002029Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.0007803Direct
Erythroid transcription factor GATA-10.04713Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0.000002914Direct
Thioredoxin-like0.00002196Direct
Nucleotidylyl transferase0.001817Inherited
Lipocalins0.001817Inherited
E set domains0.02258Inherited
"Winged helix" DNA-binding domain0.03574Inherited
Cysteine proteinases0.07257Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51905,55424
  • 51905 - FAD/NAD(P)-binding domain
  • 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain
  • 0.000002914Direct
    52833,47616
  • 52833 - Thioredoxin-like
  • 47616 - GST C-terminal domain-like
  • 0.001339Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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