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Worm Phenotype (WP): reduced brood size

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <4>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + + 5:   organ system physiology variant [WBPhenotype:0000575] <8>(430|511) (430|222|63)
+ + + + 4:   reproductive system physiology variant [WBPhenotype:0000613] <4>(424|507) (424|220|63)
+ + + 3:   fertility variant [WBPhenotype:0000145] <4>(422|506) (422|219|62)
+ + 2:   hermaphrodite fertility variant [WBPhenotype:0000806] <4>(378|463) (378|204|59)
+ 1:   brood size variant [WBPhenotype:0000673] <1>(14|17) (18|4|1)
0:   reduced brood size [WBPhenotype:0000154](9|15) (13|4|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
eIF4e-like0Direct
Calponin-homology domain, CH-domain0.0000003303Direct
WD40 repeat-like0.000001353Direct
Sm-like ribonucleoproteins0.00004367Direct
Spectrin repeat0.0000517Direct
Actin-like ATPase domain0.00006306Direct
Nucleotide-binding domain0.0001321Direct
Annexin0.0002462Direct
Activating enzymes of the ubiquitin-like proteins0.0009546Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
D-aminoacid oxidase, N-terminal domain0Direct
Choline kinase0Direct
Translation initiation factor eIF4e0Direct
Actin/HSP700.000001026Direct
Calponin-homology domain, CH-domain0.00000228Direct
WD40-repeat0.000006407Direct
Armadillo repeat0.00002232Direct
COMT-like0.000046Direct
Ubiquitin activating enzymes (UBA)0.000046Direct
D-aminoacid oxidase-like0.000046Direct
Spectrin repeat0.0000521Direct
Erythroid transcription factor GATA-10.0003057Direct
Annexin0.000378Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.0005074Direct
NagD-like0.0007235Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
eIF4e-like0Direct
Calponin-homology domain, CH-domain0.0000002675Direct
WD40 repeat-like0.000001103Direct
Sm-like ribonucleoproteins0.00003594Direct
Spectrin repeat0.00004259Direct
Actin-like ATPase domain0.00005196Direct
Nucleotide-binding domain0.0001091Direct
Annexin0.0002038Direct
Activating enzymes of the ubiquitin-like proteins0.0007998Direct
Tubulin nucleotide-binding domain-like0.0008626Direct
The spindle assembly checkpoint protein mad20.0008874Direct
Ribosomal proteins S24e, L23 and L15e0.0008874Direct
Tim10-like0.0008874Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.000008355Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00001275Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0008626Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00000206Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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