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Worm Phenotype (WP): reduced brood size

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + 5:   organ system physiology variant [WBPhenotype:0000575] <8>(445|529) (445|229|63)
+ + + + 4:   reproductive system physiology variant [WBPhenotype:0000613] <6>(432|517) (432|223|63)
+ + + 3:   fertility variant [WBPhenotype:0000145] <4>(421|512) (422|221|62)
+ + 2:   hermaphrodite fertility variant [WBPhenotype:0000806] <4>(380|472) (381|206|59)
+ 1:   brood size variant [WBPhenotype:0000673] <1>(12|17) (19|4|1)
0:   reduced brood size [WBPhenotype:0000154](8|15) (14|4|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
eIF4e-like0Direct
Calponin-homology domain, CH-domain0.0000004123Direct
WD40 repeat-like0.0000006906Direct
Sm-like ribonucleoproteins0.00005035Direct
Spectrin repeat0.00005811Direct
Actin-like ATPase domain0.00007596Direct
Nucleotide-binding domain0.0001439Direct
Annexin0.0002635Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Translation initiation factor eIF4e0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Choline kinase0Direct
Actin/HSP700.000001259Direct
Calponin-homology domain, CH-domain0.00000282Direct
WD40-repeat0.000009138Direct
Armadillo repeat0.0000254Direct
D-aminoacid oxidase-like0.00004996Direct
Ubiquitin activating enzymes (UBA)0.00004996Direct
COMT-like0.00004996Direct
Spectrin repeat0.00005833Direct
Erythroid transcription factor GATA-10.0003356Direct
Annexin0.0004037Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.0005636Direct
NagD-like0.0007825Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
eIF4e-like0Direct
Calponin-homology domain, CH-domain0.000000332Direct
WD40 repeat-like0.0000005573Direct
Sm-like ribonucleoproteins0.00004119Direct
Spectrin repeat0.00004755Direct
Actin-like ATPase domain0.00006216Direct
Nucleotide-binding domain0.0001181Direct
Annexin0.0002169Direct
Activating enzymes of the ubiquitin-like proteins0.0008639Direct
Tim10-like0.000945Direct
CAD & PB1 domains0.000945Direct
Ribosomal proteins S24e, L23 and L15e0.000945Direct
The spindle assembly checkpoint protein mad20.000945Direct
Tubulin nucleotide-binding domain-like0.0009541Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.00001008Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.00001406Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0009541Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.000002279Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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