SUPERFAMILY 1.75 HMM library and genome assignments server

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Worm Phenotype (WP): alae secretion variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
+ + 2:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ 1:   cell secretion variant [WBPhenotype:0000258] <6>(7|7) (7|0|0)
0:   alae secretion variant [WBPhenotype:0000168] <1>(2|2) (2|0|0)
- 1:   precocious alae [WBPhenotype:0000170](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog/intein (Hint) domain0.000000000000008446Direct
Multidrug efflux transporter AcrB transmembrane domain0.0005562Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog C-terminal (Hog) autoprocessing domain0.00000000000003626Direct
Multidrug efflux transporter AcrB transmembrane domain0.0005808Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Hedgehog/intein (Hint) domain0.000000000000006668Direct
Multidrug efflux transporter AcrB transmembrane domain0.000463Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)