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Worm Phenotype (WP): gonad arm morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + + 4:   organ system morphology variant [WBPhenotype:0000534] <9>(99|104) (101|47|17)
+ + + 3:   reproductive system morphology variant [WBPhenotype:0000605] <5>(49|49) (50|17|6)
+ + 2:   gonad morphology variant [WBPhenotype:0001355] <10>(29|29) (29|9|2)
+ 1:   somatic gonad morphology variant [WBPhenotype:0000977] <3>(8|8) (8|3|1)
0:   gonad arm morphology variant [WBPhenotype:0000188](8|8) (8|3|1)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleic acid-binding proteins0.0000002844Direct
GroEL-intermediate domain like0.0000006441Direct
GroEL equatorial domain-like0.0000006441Direct
GroEL apical domain-like0.000001255Direct
HMG-box0.000001427Direct
P-loop containing nucleoside triphosphate hydrolases0.000004515Direct
Tubulin nucleotide-binding domain-like0.0004042Direct
Tubulin C-terminal domain-like0.0005143Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00000005705Direct
HMG-box0.000002834Direct
Laminin-type module0.000006412Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00002806Direct
Group II chaperonin (CCT, TRIC), apical domain0.000049Direct
Tubulin, GTPase domain0.0005828Direct
Tubulin, C-terminal domain0.0007427Direct
Cyclin0.0009306Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleic acid-binding proteins0.0000002287Direct
GroEL equatorial domain-like0.0000005196Direct
GroEL-intermediate domain like0.0000005196Direct
GroEL apical domain-like0.000001015Direct
HMG-box0.000001154Direct
P-loop containing nucleoside triphosphate hydrolases0.000003668Direct
Tubulin nucleotide-binding domain-like0.0003336Direct
Tubulin C-terminal domain-like0.0004257Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000005196Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000005196Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0003336Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000005196Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)