SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): pericellular component development variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Variant [WBPhenotype:0000886] <4>
+ 1:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
0:   pericellular component development variant [WBPhenotype:0000200] <4>(30|38) (30|15|5)
- 1:   cuticle development variant [WBPhenotype:0000201] <4>(3|2) (3|0|0)
- 1:   basement membrane remodeling variant [WBPhenotype:0002065] <1>(25|35) (25|15|5)
- 1:   connective tissue development variant [WBPhenotype:0000897](0|0) (0|0|0)
- 1:   pseudocoelom development variant [WBPhenotype:0000855](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
BPTI-like0Direct
Carboxypeptidase regulatory domain-like0Direct
Zn-dependent exopeptidases0Direct
Blood coagulation inhibitor (disintegrin)0Direct
Metalloproteases ("zincins"), catalytic domain0Direct
PGBD-like0Direct
Acid proteases0.00000000000001067Direct
Cysteine proteinases0.0000000000005151Direct
Protease propeptides/inhibitors0.000000000007806Direct
alpha/beta-Hydrolases0.000000000007861Direct
Creatinase/aminopeptidase0.0000000001952Direct
Trypsin-like serine proteases0.000000002791Direct
Hedgehog/intein (Hint) domain0.00000001522Direct
TSP-1 type 1 repeat0.0000001084Direct
Subtilisin-like0.0000001292Direct
Bacterial exopeptidase dimerisation domain0.0000001292Direct
DPP6 N-terminal domain-like0.0000001938Direct
Serine protease inhibitors0.0000002372Direct
Hemopexin-like domain0.0000007336Direct
LuxS/MPP-like metallohydrolase0.000003082Direct
Integrin domains0.000003764Direct
Spermadhesin, CUB domain0.000005084Direct
Serpins0.00001481Direct
Leukotriene A4 hydrolase N-terminal domain0.00003387Direct
Thyroglobulin type-1 domain0.00005015Direct
SMAD MH1 domain0.00005015Direct
beta-lactamase/transpeptidase-like0.00007365Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.000675Direct
SMAD/FHA domain0.001989Inherited
PAZ domain0.02958Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
DPP6 catalytic domain-like0Direct
Acylamino-acid-releasing enzyme, C-terminal donain0Direct
Blood coagulation inhibitor (disintegrin)0Direct
Papain-like0Direct
Proprotein convertase P-domain0Direct
Integrin domains0Direct
Small Kunitz-type inhibitors & BPTI-like toxins0Direct
Astacin0Direct
Neutral endopeptidase (neprilysin)0Direct
Methionine aminopeptidase, insert domain0Direct
Carboxypeptidase regulatory domain0Direct
DPP6 N-terminal domain-like0Direct
Matrix metalloproteases, catalytic domain0Direct
Pepsin-like0.000000000000007209Direct
Pancreatic carboxypeptidases0.000000000002892Direct
Reprolysin-like0.00000000002674Direct
Bacterial dinuclear zinc exopeptidases0.0000000002299Direct
Creatinase/aminopeptidase0.000000001098Direct
Serine carboxypeptidase-like0.0000000048Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.0000000656Direct
Subtilases0.0000003426Direct
Bacterial exopeptidase dimerisation domain0.0000003426Direct
TSP-1 type 1 repeat0.0000008639Direct
Hemopexin-like domain0.000001931Direct
Pancreatic carboxypeptidase, activation domain0.000006383Direct
MPP-like0.00001007Direct
Eukaryotic proteases0.00001605Direct
SMAD domain0.00001611Direct
Serpins0.00002972Direct
ATI-like0.00003442Direct
beta-Lactamase/D-ala carboxypeptidase0.00003442Direct
Thyroglobulin type-1 domain0.0001021Direct
Gamma-glutamyltranspeptidase-like0.0001021Direct
SMAD MH1 domain0.0001021Direct
Leukotriene A4 hydrolase N-terminal domain0.0001139Direct
Leukotriene A4 hydrolase catalytic domain0.0001139Direct
Spermadhesin, CUB domain0.000135Direct
Acetylcholinesterase-like0.0004942Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Metalloproteases ("zincins"), catalytic domain0Direct
Zn-dependent exopeptidases0Direct
PGBD-like0Direct
BPTI-like0Direct
Blood coagulation inhibitor (disintegrin)0Direct
Carboxypeptidase regulatory domain-like0Direct
Acid proteases0.000000000000008422Direct
Cysteine proteinases0.0000000000004081Direct
Protease propeptides/inhibitors0.000000000006207Direct
alpha/beta-Hydrolases0.000000000006251Direct
Creatinase/aminopeptidase0.0000000001557Direct
Trypsin-like serine proteases0.000000002237Direct
Hedgehog/intein (Hint) domain0.00000001222Direct
TSP-1 type 1 repeat0.0000000875Direct
Bacterial exopeptidase dimerisation domain0.0000001043Direct
Subtilisin-like0.0000001043Direct
DPP6 N-terminal domain-like0.0000001568Direct
Serine protease inhibitors0.000000192Direct
Hemopexin-like domain0.0000005966Direct
LuxS/MPP-like metallohydrolase0.00000252Direct
Integrin domains0.000003078Direct
Spermadhesin, CUB domain0.000004159Direct
Serpins0.00001214Direct
Leukotriene A4 hydrolase N-terminal domain0.00002785Direct
Thyroglobulin type-1 domain0.00004131Direct
SMAD MH1 domain0.00004131Direct
beta-lactamase/transpeptidase-like0.0000607Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0005636Direct
SMAD/FHA domain0.001676Inherited
PAZ domain0.02595Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55920,46785
  • 55920 - Creatinase/aminopeptidase
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    55486,57552
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 57552 - Blood coagulation inhibitor (disintegrin)
  • 0Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0Direct
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0Direct
    55486,49854
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 49854 - Spermadhesin, CUB domain
  • 0Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0Direct
    54897,52743
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 0Direct
    53187,49464
  • 53187 - Zn-dependent exopeptidases
  • 49464 - Carboxypeptidase regulatory domain-like
  • 0Direct
    57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0.000000000000121Direct
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
  • 0.000000003466Direct
    82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.00000001222Direct
    54897,53187
  • 54897 - Protease propeptides/inhibitors
  • 53187 - Zn-dependent exopeptidases
  • 0.00000008944Direct
    53187,55031
  • 53187 - Zn-dependent exopeptidases
  • 55031 - Bacterial exopeptidase dimerisation domain
  • 0.0000001043Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.00000252Direct
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.00001214Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    54897,52743,49785
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0Direct
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0Direct
    57362,57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0Direct
    82895,82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.00000001222Direct
    63411,63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.00001449Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)