SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): defecation contraction variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + + 3:   behavior variant [WBPhenotype:0000517] <3>(136|138) (138|59|22)
+ + 2:   organism behavior variant [WBPhenotype:0000525] <22>(136|138) (138|59|22)
+ 1:   defecation variant [WBPhenotype:0000650] <5>(12|12) (13|6|2)
0:   defecation contraction variant [WBPhenotype:0000210] <6>(6|5) (6|4|1)
- 1:   anterior body contraction variant [WBPhenotype:0001476] <1>(0|0) (0|0|0)
- 1:   expulsion variant [WBPhenotype:0000205] <1>(2|1) (2|1|0)
- 1:   posterior body wall contraction defecation cycle variant [WBPhenotype:0000157] <1>(2|3) (2|3|1)
- 1:   body wall muscle contraction interval during defecation abnormal [WBPhenotype:0000156](0|0) (0|0|0)
- 1:   defecation contraction asynchronous [WBPhenotype:0000211](0|0) (0|0|0)
- 1:   intestinal contractions variant [WBPhenotype:0000994](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
C2 domain (Calcium/lipid-binding domain, CaLB)0Direct
PLC-like phosphodiesterases0.0000000000002686Direct
PLP-dependent transferases0.0001306Direct
EF-hand0.0001687Direct
PH domain-like0.0005989Direct
Voltage-gated potassium channels0.003127Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Mammalian PLC0Direct
Synaptotagmin-like (S variant)6.25e-16Direct
PLC-like (P variant)0.0000000000003376Direct
Pleckstrin-homology domain (PH domain)0.0001401Direct
Voltage-gated potassium channels0.003135Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
C2 domain (Calcium/lipid-binding domain, CaLB)0Direct
PLC-like phosphodiesterases0.000000000000212Direct
PLP-dependent transferases0.0001074Direct
EF-hand0.0001389Direct
PH domain-like0.0004975Direct
Voltage-gated potassium channels0.002644Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50729,47473
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 0Direct
    47473,51695
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct
    51695,49562
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 0Direct
    49562,49562
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
  • 7e-16Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50729,47473,51695
  • 50729 - PH domain-like
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)